Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxO   Type   Regulator
Locus tag   FORC53_RS11065 Genome accession   NZ_CP019290
Coordinates   2189175..2190575 (-) Length   466 a.a.
NCBI ID   WP_011149911.1    Uniprot ID   A0AAN1PPC9
Organism   Vibrio vulnificus strain FORC_053     
Function   promote HapR production (predicted from homology)   
Competence regulation

Genomic Context

Location: 2184175..2195575
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC53_RS11030 (FORC53_1982) moaE 2184750..2185205 (-) 456 WP_011080885.1 molybdopterin synthase catalytic subunit MoaE -
  FORC53_RS11035 (FORC53_1983) moaD 2185207..2185452 (-) 246 WP_011080886.1 molybdopterin synthase sulfur carrier subunit -
  FORC53_RS11040 (FORC53_1984) moaC 2185449..2185928 (-) 480 WP_011080887.1 cyclic pyranopterin monophosphate synthase MoaC -
  FORC53_RS11045 (FORC53_1985) moaB 2185939..2186451 (-) 513 WP_011080888.1 molybdenum cofactor biosynthesis protein B -
  FORC53_RS11050 (FORC53_1986) moaA 2186532..2187521 (-) 990 WP_039553216.1 GTP 3',8-cyclase MoaA -
  FORC53_RS11055 (FORC53_1987) - 2187837..2188727 (+) 891 WP_011080890.1 YvcK family protein -
  FORC53_RS11060 (FORC53_1988) luxU 2188828..2189175 (-) 348 WP_011080891.1 quorum-sensing phosphorelay protein LuxU -
  FORC53_RS11065 (FORC53_1989) luxO 2189175..2190575 (-) 1401 WP_011149911.1 quorum-sensing sigma-54 dependent transcriptional regulator LuxO Regulator
  FORC53_RS11070 (FORC53_1990) uvrB 2190849..2192879 (-) 2031 WP_013572115.1 excinuclease ABC subunit UvrB -
  FORC53_RS11080 (FORC53_1991) rsxA 2193761..2194339 (+) 579 WP_011080895.1 electron transport complex subunit RsxA -
  FORC53_RS11085 (FORC53_1992) rsxB 2194341..2194937 (+) 597 WP_011080896.1 electron transport complex subunit RsxB -

Sequence

Protein


Download         Length: 466 a.a.        Molecular weight: 52120.68 Da        Isoelectric Point: 6.2540

>NTDB_id=214600 FORC53_RS11065 WP_011149911.1 2189175..2190575(-) (luxO) [Vibrio vulnificus strain FORC_053]
MQQITTTKQRYLLMVEDTASVAALYRSYLMPLGIDINIVGTGRDAIDSLKHRIPDLILLDLRLPDMTGMDVLHAVKASHP
DVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKASKLKNDADSAGSQNYQGFIGSSQKMQQVYRTI
DSAASSKASIFITGESGTGKEVCAEAIHAASRRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATDRQGAAELADGG
TLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRER
GEDVIEIAYSLLGYMSHEEGKNFVRFSQPVIDRFNEYEWPGNVRQLQNVLRNVVVLNNGKEITMEMLPPPLNQPFERKES
VQPDLSELISVRDICPLWLTEKLAIEQAIKACDGNIPRAAGYLDVSPSTIYRKLQAWNEKEEKQKA

Nucleotide


Download         Length: 1401 bp        

>NTDB_id=214600 FORC53_RS11065 WP_011149911.1 2189175..2190575(-) (luxO) [Vibrio vulnificus strain FORC_053]
ATGCAACAAATAACGACAACGAAACAGCGCTACTTGCTGATGGTAGAAGACACCGCTTCTGTCGCAGCACTCTATCGCTC
CTATCTCATGCCATTGGGTATCGATATCAATATCGTGGGTACTGGGCGTGACGCGATAGACAGTTTAAAACATCGCATTC
CAGATCTTATTCTGCTGGATTTACGTCTACCGGACATGACGGGAATGGACGTATTGCATGCAGTGAAAGCAAGTCACCCT
GATGTTCCTATCATTTTCATGACCGCACACGGCTCGATCGATACTGCCGTTGAAGCTATGCGACATGGGTCTCAGGATTT
TCTTATCAAGCCATGCGAAGCGGATCGCTTGAGGGTCACGGTAAACAACGCTATCCGCAAAGCGAGCAAATTGAAGAATG
ATGCGGACAGTGCAGGCAGCCAAAATTATCAAGGCTTTATCGGCAGTAGCCAAAAAATGCAGCAGGTTTATCGCACCATT
GACTCCGCGGCGAGCAGTAAAGCAAGCATCTTTATCACAGGTGAAAGTGGTACAGGTAAAGAGGTGTGCGCAGAAGCCAT
TCATGCGGCCAGTCGACGTGGAGACAAGCCATTTATCGCGATTAACTGTGCTGCAATTCCCAAGGATTTGATTGAAAGCG
AGCTATTTGGTCATGTCAAAGGTGCGTTTACCGGCGCTGCGACCGATCGCCAAGGGGCGGCAGAGCTCGCTGATGGGGGC
ACACTTTTCCTGGATGAGCTGTGTGAAATGGACTTGGATCTGCAAACAAAATTGCTGCGTTTTATCCAAACGGGTACTTT
CCAAAAAGTAGGCTCTTCAAAAATGAAGAGTGTTGACGTGCGTTTTGTGTGCGCGACAAACCGAGACCCTTGGAAAGAGG
TACAAGAAGGGCGCTTTCGTGAAGATTTGTACTACCGACTTTATGTGATTCCACTGCACTTGCCACCACTTCGTGAGCGT
GGAGAGGATGTCATCGAGATCGCTTACTCGTTACTGGGTTACATGTCACACGAGGAAGGGAAAAACTTTGTTCGCTTCTC
TCAACCTGTGATAGATAGATTTAACGAATATGAGTGGCCAGGCAATGTGCGTCAGTTGCAAAATGTGCTGCGTAACGTGG
TGGTTCTTAACAACGGTAAAGAGATTACCATGGAGATGCTGCCGCCTCCTTTGAACCAGCCCTTTGAACGCAAAGAAAGT
GTGCAGCCTGATCTGAGTGAGTTGATTTCCGTCAGGGATATTTGTCCATTGTGGTTGACAGAGAAATTGGCGATTGAACA
AGCGATCAAAGCGTGTGATGGTAACATTCCGAGAGCCGCTGGCTATCTGGATGTCAGCCCGTCAACGATTTATCGCAAGT
TACAGGCGTGGAACGAAAAAGAAGAAAAACAGAAAGCATAA

Domains

Predicted by InterproScan.

Bacterial regulatory protein, Fis family (HTH_8)

(417-457)

Response regulator receiver domain (Response_reg)

(13-121)

Sigma-54 interaction domain (Sigma54_activat)

(147-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxO Vibrio cholerae strain A1552

85.714

96.137

0.824

Multiple sequence alignment