Detailed information NTG0214573

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC53_RS01540
• Genome accession: NZ_CP019290
• Coordinates: 305439..306446 (-)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_053
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 300439..311446

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC53_RS01510 (FORC53_0269)	zapB	300564..300806 (-)	243	WP_011079328.1	cell division protein ZapB	-
FORC53_RS01515 (FORC53_0270)	rraA	301028..301549 (-)	522	WP_011079329.1	ribonuclease E activity regulator RraA	-
FORC53_RS01520 (FORC53_0271)	-	301625..302542 (-)	918	WP_118893217.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC53_RS01525 (FORC53_0272)	hslU	302708..304039 (-)	1332	WP_058645415.1	HslU--HslV peptidase ATPase subunit	-
FORC53_RS01530 (FORC53_0273)	hslV	304067..304621 (-)	555	WP_011079332.1	ATP-dependent protease subunit HslV	-
FORC53_RS01535 (FORC53_0274)	-	304772..305329 (-)	558	WP_011151294.1	SPOR domain-containing protein	-
FORC53_RS01540 (FORC53_0275)	cytR	305439..306446 (-)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
FORC53_RS01545 (FORC53_0276)	priA	306675..308879 (-)	2205	WP_045620693.1	primosomal protein N'	-
FORC53_RS01550 (FORC53_0277)	rpmE	309160..309381 (+)	222	WP_011079336.1	50S ribosomal protein L31	-
FORC53_RS01555 (FORC53_0278)	-	309659..310936 (+)	1278	WP_011079337.1	malic enzyme-like NAD(P)-binding protein	-
FORC53_RS01560 (FORC53_0279)	metJ	311023..311340 (-)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=214573 FORC53_RS01540 WP_011079334.1 305439..306446(-) (cytR) [Vibrio vulnificus strain FORC_053]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=214573 FORC53_RS01540 WP_011079334.1 305439..306446(-) (cytR) [Vibrio vulnificus strain FORC_053]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCAGTGTTGGAAGCTGGTTATTCCCCAAACTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAACAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTATTGCTCGGTACCGACTTACCGTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGATCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCAGCATTTGAAGCGGTGAACTACCTGACCCAATTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCAGGCATCACAATGAACCCACAATACT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTACTAGAAATGAATGACGCGCCAACCGCC
GTTTTCTGCCATTGTGACACTATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCGCAAGATCT
GTCGATTGTCGGCTTCGATGACATTCAGTTCGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAGCCACGCTATG
AGATTGGTCGTCAAGCGATGCTGATGATGTTAGAGCTGCTGAAAGGACATGACATTCACAGTGGCTCACGCTTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCAGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875