Detailed information NTG0214304

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BVH75_RS26070
• Genome accession: NZ_CP019230
• Coordinates: 4855271..4856398 (+)
• Length: 375 a.a.
• NCBI ID: WP_000470745.1
• Uniprot ID: A0A9W5QA17
• Organism: Bacillus thuringiensis strain YGd22-03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 4850271..4861398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVH75_RS26040 (BVH75_26015)	spoIIIJ	4850310..4851077 (-)	768	WP_087876001.1	YidC family membrane integrase SpoIIIJ	-
BVH75_RS26045 (BVH75_26020)	rnpA	4851130..4851477 (-)	348	WP_087876002.1	ribonuclease P protein component	-
BVH75_RS26050 (BVH75_26025)	rpmH	4851554..4851688 (-)	135	WP_000831901.1	50S ribosomal protein L34	-
BVH75_RS26055 (BVH75_26030)	dnaA	4852253..4853593 (+)	1341	WP_000428017.1	chromosomal replication initiator protein DnaA	-
BVH75_RS26060 (BVH75_26035)	dnaN	4853773..4854918 (+)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
BVH75_RS26065 (BVH75_26040)	yaaA	4855046..4855258 (+)	213	WP_000821364.1	S4 domain-containing protein YaaA	-
BVH75_RS26070 (BVH75_26045)	recF	4855271..4856398 (+)	1128	WP_000470745.1	DNA replication/repair protein RecF	Machinery gene
BVH75_RS26075 (BVH75_26050)	gyrB	4856437..4858359 (+)	1923	WP_000435982.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BVH75_RS26080 (BVH75_26055)	gyrA	4858448..4860919 (+)	2472	WP_001282864.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43362.67 Da
• Isoelectric Point: 6.6001

>NTDB_id=214304 BVH75_RS26070 WP_000470745.1 4855271..4856398(+) (recF) [Bacillus thuringiensis strain YGd22-03]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRE

Nucleotide

• Length: 1128 bp

>NTDB_id=214304 BVH75_RS26070 WP_000470745.1 4855271..4856398(+) (recF) [Bacillus thuringiensis strain YGd22-03]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCACAAGGGAAAACAAATTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGATTTTGGTCAAATAAAGGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTGTATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGAGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGACGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGACAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTGATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGTTGGATGATGTTTTATCA
GAATTAGATGATTATCGTCAATCACATCTTTTAAATACAATTCAAGGAAAAGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGAAGCGAAAACAATTCATGTAACGAACGGCACTGTAGATTGTGAAATAGATA
GGGAATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.576	98.133	0.653