Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BWI80_RS10050 | Genome accession | NZ_CP019217 |
| Coordinates | 2119671..2120051 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain XH731 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2114671..2125051
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BWI80_RS10020 (BWI80_09985) | tadA | 2114789..2115292 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| BWI80_RS10025 (BWI80_09990) | - | 2115299..2116423 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BWI80_RS10030 (BWI80_09995) | ung | 2116420..2117133 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| BWI80_RS10035 (BWI80_10000) | - | 2117184..2117780 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| BWI80_RS10040 (BWI80_10005) | gspK | 2118011..2118970 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| BWI80_RS10045 (BWI80_10010) | xcpW | 2118970..2119671 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BWI80_RS10050 (BWI80_10015) | xcpV | 2119671..2120051 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BWI80_RS10055 (BWI80_10020) | - | 2120041..2120595 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| BWI80_RS10060 (BWI80_10025) | - | 2120605..2121213 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| BWI80_RS10065 (BWI80_10030) | - | 2121251..2122024 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| BWI80_RS10070 (BWI80_10035) | - | 2122042..2122383 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| BWI80_RS10075 (BWI80_10040) | - | 2122395..2123375 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| BWI80_RS10080 (BWI80_10045) | kdsB | 2123387..2124148 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=214163 BWI80_RS10050 WP_000836911.1 2119671..2120051(-) (xcpV) [Acinetobacter baumannii strain XH731]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=214163 BWI80_RS10050 WP_000836911.1 2119671..2120051(-) (xcpV) [Acinetobacter baumannii strain XH731]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |