Detailed information NTG0213963

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CDW44_RS16730
• Genome accession: NZ_CP024650
• Coordinates: 3297472..3298713 (+)
• Length: 413 a.a.
• NCBI ID: WP_016242961.1
• Uniprot ID: -
• Organism: Escherichia coli strain BH100 substr. MG2014
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3292472..3303713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CDW44_RS16715 (CDW44_17025)	-	3292987..3294663 (+)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-
CDW44_RS16720 (CDW44_17030)	kdsB	3294673..3295413 (+)	741	WP_021524955.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CDW44_RS16725 (CDW44_17035)	-	3295410..3297437 (+)	2028	WP_021524956.1	capsular polysaccharide biosynthesis protein	-
CDW44_RS16730 (CDW44_17040)	kpsS	3297472..3298713 (+)	1242	WP_016242961.1	capsular biosynthesis protein	Regulator
CDW44_RS16735 (CDW44_17045)	-	3298834..3300174 (-)	1341	WP_021524957.1	glycosyltransferase family A protein	-
CDW44_RS16740 (CDW44_17050)	-	3300303..3301472 (-)	1170	WP_000704785.1	nucleotide sugar dehydrogenase	-
CDW44_RS16745 (CDW44_17055)	-	3301621..3302289 (-)	669	WP_001025464.1	acyltransferase	-
CDW44_RS16750 (CDW44_17060)	glf	3302316..3303422 (-)	1107	WP_000272502.1	UDP-galactopyranose mutase	-

Sequence

Protein

• Length: 413 a.a.
• Molecular weight: 49220.04 Da
• Isoelectric Point: 10.1559

>NTDB_id=213963 CDW44_RS16730 WP_016242961.1 3297472..3298713(+) (kpsS) [Escherichia coli strain BH100 substr. MG2014]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLVKTQVNGVYYGEMIFNKIKKD
KKDCIMLSKKTSQ

Nucleotide

• Length: 1242 bp

>NTDB_id=213963 CDW44_RS16730 WP_016242961.1 3297472..3298713(+) (kpsS) [Escherichia coli strain BH100 substr. MG2014]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTAAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCGCGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGCGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGAGTCATTTATGTGCACGATCTCCCGATGCCGGAATTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGTGGGTATTTATTGGTGAAGACGCAGGTTAATGGGGTTTATTATGGGGAGATGATTTTTAACAAGATAAAAAAAGAT
AAAAAAGATTGTATTATGCTATCAAAAAAAACATCACAATGA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.646	95.884	0.38