Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   BVG18_RS14455 Genome accession   NZ_CP019143
Coordinates   2948155..2950377 (+) Length   740 a.a.
NCBI ID   WP_086044187.1    Uniprot ID   -
Organism   Acinetobacter lwoffii strain ZS207     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2943155..2955377
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVG18_RS14435 (BVG18_04265) lnt 2943951..2945510 (+) 1560 WP_086044185.1 apolipoprotein N-acyltransferase -
  BVG18_RS14440 (BVG18_04270) - 2945665..2946000 (-) 336 WP_086044186.1 hypothetical protein -
  BVG18_RS14445 (BVG18_04275) gspG 2946285..2946719 (-) 435 WP_085064955.1 type II secretion system major pseudopilin GspG -
  BVG18_RS14450 (BVG18_04280) gspF 2946799..2948004 (-) 1206 WP_004729358.1 type II secretion system inner membrane protein GspF -
  BVG18_RS14455 (BVG18_04285) priA 2948155..2950377 (+) 2223 WP_086044187.1 primosomal protein N' Machinery gene
  BVG18_RS14460 (BVG18_04290) - 2950453..2952306 (+) 1854 Protein_2793 cation:proton antiporter -
  BVG18_RS14465 (BVG18_04295) - 2952357..2953232 (+) 876 WP_004278571.1 Hsp33 family molecular chaperone HslO -
  BVG18_RS14470 (BVG18_04300) - 2953554..2954015 (+) 462 WP_004647343.1 DUF2147 domain-containing protein -
  BVG18_RS14475 (BVG18_04305) - 2954503..2954832 (+) 330 WP_004278573.1 chaperone modulator CbpM -
  BVG18_RS14480 (BVG18_04310) - 2954922..2955185 (+) 264 WP_004729352.1 DUF465 domain-containing protein -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84179.10 Da        Isoelectric Point: 8.4577

>NTDB_id=213395 BVG18_RS14455 WP_086044187.1 2948155..2950377(+) (priA) [Acinetobacter lwoffii strain ZS207]
MQNSHTDSSPLYRVRIAVPVHVFDCFDYTMSAEQFEQAQIGARVLVSFGRQNLVGVIIEKLSADTPLDPRFKLKAVTELL
DERAIIDGKVLSLLTWSAQYYQFPIGEVFHSALPTLLRQGKPYNLLARTWKLLDTNAEAKVRRSDKQQEAYRILKLHPVG
TTENVLNMAGIETATLKALEKKEICACVLEPQDFSPQPMQLAQMPLTANPEQKHAVEQVLKYRNQYQAFLLDGLTGSGKT
EVYLQIMEQVLKQGKQVLVLVPEIGLTPQTISRFQSRFHCHIALLHSGLNDSKRLQAWQSAETGKASIVLGTRSAIYTPM
PNLGLIILDEEHDLSFKQQEGFRYHARDVALYRGYLQQCPVLLGSATPSIDSYALVEHGKMQALELNQRAGTALMPKIHI
LDLKVAQKKHGISLQLIQDIKKRLEKKEQVLIFLNRRGYAPVLLCGSCGWQAQCPHCDANFTVHRQPYQHLHCHHCGTIH
RMPEHCPQCQHQELVTLGMGTGKVEEHLNELFPDFEVIRVDRDSTSRVGSWQKIYDKIQKSEPAILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIVQVAGRAGRGEHKGDVYLQTLRPDHVLLNTLVNENYRVFAQQTLKERQIAQM
PPYRYAILIRCESKDQSQNTEFLQKHAALLRQYPDLALDIWGPIPAPMERKAGRYQSHMVLLSADRPRLHYYVRSWWQNM
LQDKPSSMKLTLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=213395 BVG18_RS14455 WP_086044187.1 2948155..2950377(+) (priA) [Acinetobacter lwoffii strain ZS207]
ATGCAAAATTCTCACACCGATTCAAGTCCACTTTATCGCGTACGCATTGCTGTACCTGTACATGTATTTGATTGTTTTGA
TTACACGATGAGTGCAGAACAATTTGAACAGGCACAGATTGGGGCACGCGTACTGGTGTCGTTTGGTCGGCAGAATCTGG
TCGGGGTGATTATTGAAAAACTGTCCGCAGATACTCCTCTCGACCCGCGCTTTAAACTTAAGGCTGTGACCGAACTGCTC
GATGAACGCGCCATTATAGATGGCAAAGTTTTAAGTTTGTTGACATGGTCAGCGCAGTATTACCAGTTCCCGATCGGTGA
AGTTTTCCACAGTGCCCTGCCGACCCTACTGCGTCAGGGCAAGCCTTATAACCTGCTGGCCCGTACCTGGAAGCTCCTGG
ACACTAATGCCGAGGCCAAAGTACGCCGTTCGGACAAGCAGCAGGAAGCCTACCGGATTCTAAAACTGCATCCGGTCGGG
ACTACTGAAAATGTGCTGAATATGGCCGGGATTGAAACCGCGACCTTAAAAGCACTGGAGAAAAAAGAGATTTGCGCCTG
TGTGCTGGAGCCACAAGATTTCAGTCCGCAGCCAATGCAGCTGGCACAGATGCCGCTAACTGCCAATCCTGAACAAAAAC
ATGCAGTCGAACAGGTATTAAAATATCGCAATCAATATCAGGCTTTTTTACTGGATGGTCTGACCGGTAGCGGTAAAACT
GAAGTATATTTGCAGATCATGGAGCAGGTACTGAAACAGGGCAAACAGGTGCTGGTGCTGGTGCCGGAAATCGGCCTGAC
GCCGCAAACCATCAGCCGTTTTCAGTCCCGTTTTCATTGCCATATTGCGCTGCTGCATTCCGGCCTGAATGATTCCAAAC
GGCTACAAGCCTGGCAGTCAGCGGAAACCGGCAAAGCCTCAATCGTACTCGGTACACGTTCCGCCATTTATACGCCAATG
CCGAATCTGGGCCTGATCATTCTGGATGAAGAACATGACCTGTCCTTTAAACAGCAGGAAGGCTTCCGCTATCATGCCCG
CGATGTGGCTTTGTATCGCGGGTATTTACAGCAATGTCCGGTACTGCTGGGTTCAGCAACGCCGAGTATCGACAGTTATG
CGCTGGTTGAACATGGCAAGATGCAGGCGCTGGAGCTGAATCAACGTGCCGGTACTGCACTGATGCCCAAAATCCATATT
CTGGATTTAAAAGTTGCACAGAAAAAGCATGGAATTAGCCTGCAACTGATTCAGGACATCAAAAAGCGTCTGGAGAAAAA
AGAACAGGTGCTGATTTTTTTAAATCGCCGTGGCTATGCTCCCGTCCTACTTTGTGGCAGCTGTGGCTGGCAGGCGCAAT
GTCCGCACTGTGATGCCAACTTCACTGTACACCGTCAGCCTTATCAGCATCTGCATTGCCATCACTGCGGCACTATTCAC
CGGATGCCGGAACACTGCCCGCAATGTCAGCATCAGGAACTGGTTACACTGGGTATGGGCACCGGCAAAGTCGAAGAACA
TCTGAATGAACTCTTTCCGGATTTTGAGGTGATTCGGGTCGATCGAGATTCCACTAGTCGGGTCGGCAGCTGGCAGAAAA
TCTATGACAAGATTCAGAAAAGCGAACCGGCAATTCTGCTCGGCACCCAGATGCTGGCCAAAGGCCATCATTTTCCTTAT
GTGACGCTAGTCGCCATTCTGGATATTGATTCCGGTCTGCTGAGCGTGGATTTCCGTGCTACTGAACGGACTGCGCAACT
GATCGTGCAGGTTGCCGGACGTGCCGGACGTGGTGAACACAAAGGCGATGTCTATTTGCAAACGCTCAGGCCTGATCATG
TCCTGCTGAATACCCTGGTCAATGAAAATTATCGCGTGTTTGCCCAGCAAACCTTAAAAGAACGGCAGATCGCCCAGATG
CCGCCCTATCGTTATGCCATCCTGATTCGCTGTGAATCCAAGGATCAGTCACAAAATACCGAATTCTTACAGAAACATGC
AGCACTCCTCAGGCAATATCCTGATCTGGCGCTGGACATCTGGGGACCGATTCCTGCGCCAATGGAACGCAAGGCGGGGC
GCTATCAGTCGCATATGGTGCTATTGTCAGCGGATCGTCCACGTTTGCATTACTATGTGCGCAGCTGGTGGCAAAACATG
CTGCAGGACAAACCTTCCAGCATGAAGCTCACGCTGGACATCGACCCTCAGGAACTGAGCTAA

Domains

Predicted by InterproScan.

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)

Type III restriction enzyme, res subunit (ResIII)

(209-369)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.253

99.189

0.707

Multiple sequence alignment