Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BVG18_RS06630 | Genome accession | NZ_CP019143 |
| Coordinates | 1325317..1325730 (+) | Length | 137 a.a. |
| NCBI ID | WP_077067977.1 | Uniprot ID | - |
| Organism | Acinetobacter lwoffii strain ZS207 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1320317..1330730
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BVG18_RS06600 (BVG18_12145) | kdsB | 1321058..1321819 (+) | 762 | WP_004278879.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| BVG18_RS06605 (BVG18_12150) | - | 1321834..1322814 (+) | 981 | WP_044109541.1 | DNA polymerase III subunit delta' C-terminal domain-containing protein | - |
| BVG18_RS06610 (BVG18_12155) | - | 1322830..1323171 (+) | 342 | WP_004645468.1 | PilZ domain-containing protein | - |
| BVG18_RS06615 (BVG18_12160) | - | 1323199..1323972 (+) | 774 | WP_005106566.1 | TatD family hydrolase | - |
| BVG18_RS06620 (BVG18_12165) | - | 1324014..1324628 (+) | 615 | WP_005252237.1 | TetR/AcrR family transcriptional regulator | - |
| BVG18_RS06625 (BVG18_12170) | - | 1324638..1325189 (+) | 552 | WP_005106567.1 | type II secretion system protein | - |
| BVG18_RS06630 (BVG18_12175) | xcpV | 1325317..1325730 (+) | 414 | WP_077067977.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BVG18_RS06635 (BVG18_12180) | xcpW | 1325727..1326368 (+) | 642 | WP_044109537.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BVG18_RS06640 (BVG18_12185) | gspK | 1326375..1327346 (+) | 972 | WP_081407897.1 | type II secretion system minor pseudopilin GspK | - |
| BVG18_RS06645 (BVG18_12190) | - | 1327499..1328095 (+) | 597 | WP_044109536.1 | 6-carboxytetrahydropterin synthase | - |
| BVG18_RS06650 (BVG18_12195) | ung | 1328142..1328855 (+) | 714 | WP_005247316.1 | uracil-DNA glycosylase | - |
| BVG18_RS06655 (BVG18_12200) | - | 1328852..1329973 (+) | 1122 | WP_005247315.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BVG18_RS06660 (BVG18_12205) | tadA | 1329980..1330495 (+) | 516 | WP_044109534.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 15257.39 Da Isoelectric Point: 7.0135
>NTDB_id=213381 BVG18_RS06630 WP_077067977.1 1325317..1325730(+) (xcpV) [Acinetobacter lwoffii strain ZS207]
MSLRSSVTRLNRASGFTLLEVMVALAIFATAAMTLSKVAMQYTQSTSNAILRTKAQFVALNEVAQMEINQEWMEGTASKQ
LTQQGETWQIDKRSEPTVSPNVQRIELQISLVNQDSGQVESGISSLMFFNHRMNNTP
MSLRSSVTRLNRASGFTLLEVMVALAIFATAAMTLSKVAMQYTQSTSNAILRTKAQFVALNEVAQMEINQEWMEGTASKQ
LTQQGETWQIDKRSEPTVSPNVQRIELQISLVNQDSGQVESGISSLMFFNHRMNNTP
Nucleotide
Download Length: 414 bp
>NTDB_id=213381 BVG18_RS06630 WP_077067977.1 1325317..1325730(+) (xcpV) [Acinetobacter lwoffii strain ZS207]
ATGTCGCTCAGGTCGAGTGTTACTCGACTTAATCGTGCCTCAGGTTTTACTTTGTTGGAAGTCATGGTGGCCTTGGCAAT
TTTTGCAACCGCAGCTATGACCCTGAGCAAAGTCGCAATGCAATATACCCAGTCGACCTCGAATGCCATTCTACGTACCA
AAGCACAGTTTGTTGCCTTAAATGAAGTGGCGCAAATGGAAATCAATCAGGAATGGATGGAAGGCACGGCTTCCAAACAG
CTGACCCAGCAAGGTGAAACCTGGCAGATTGACAAGCGTAGTGAGCCGACGGTCAGTCCGAATGTCCAGCGAATCGAATT
ACAGATTAGTCTGGTTAATCAGGACAGTGGTCAGGTTGAATCTGGCATCAGCAGTCTGATGTTCTTTAATCATCGCATGA
ACAATACCCCATGA
ATGTCGCTCAGGTCGAGTGTTACTCGACTTAATCGTGCCTCAGGTTTTACTTTGTTGGAAGTCATGGTGGCCTTGGCAAT
TTTTGCAACCGCAGCTATGACCCTGAGCAAAGTCGCAATGCAATATACCCAGTCGACCTCGAATGCCATTCTACGTACCA
AAGCACAGTTTGTTGCCTTAAATGAAGTGGCGCAAATGGAAATCAATCAGGAATGGATGGAAGGCACGGCTTCCAAACAG
CTGACCCAGCAAGGTGAAACCTGGCAGATTGACAAGCGTAGTGAGCCGACGGTCAGTCCGAATGTCCAGCGAATCGAATT
ACAGATTAGTCTGGTTAATCAGGACAGTGGTCAGGTTGAATCTGGCATCAGCAGTCTGATGTTCTTTAATCATCGCATGA
ACAATACCCCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
71.667 |
87.591 |
0.628 |