Detailed information NTG0213351

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FORC54_RS14895
• Genome accession: NZ_CP019121
• Coordinates: 2957433..2958440 (+)
• Length: 335 a.a.
• NCBI ID: WP_011079334.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_054
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2952433..2963440

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC54_RS14875 (FORC54_2680)	metJ	2952538..2952855 (+)	318	WP_011079338.1	met regulon transcriptional regulator MetJ	-
FORC54_RS14880 (FORC54_2681)	-	2952942..2954219 (-)	1278	WP_101958986.1	malic enzyme-like NAD(P)-binding protein	-
FORC54_RS14885 (FORC54_2682)	rpmE	2954498..2954719 (-)	222	WP_011079336.1	50S ribosomal protein L31	-
FORC54_RS14890 (FORC54_2683)	priA	2955000..2957204 (+)	2205	WP_101958987.1	primosomal protein N'	-
FORC54_RS14895 (FORC54_2684)	cytR	2957433..2958440 (+)	1008	WP_011079334.1	DNA-binding transcriptional regulator CytR	Regulator
FORC54_RS14900 (FORC54_2685)	-	2958548..2959105 (+)	558	WP_017419640.1	SPOR domain-containing protein	-
FORC54_RS14905 (FORC54_2686)	hslV	2959255..2959809 (+)	555	WP_017419639.1	ATP-dependent protease subunit HslV	-
FORC54_RS14910 (FORC54_2687)	hslU	2959837..2961168 (+)	1332	WP_011079331.1	HslU--HslV peptidase ATPase subunit	-
FORC54_RS14915 (FORC54_2688)	-	2961333..2962250 (+)	918	WP_101958988.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FORC54_RS14920 (FORC54_2689)	rraA	2962326..2962838 (+)	513	WP_017419637.1	ribonuclease E activity regulator RraA	-
FORC54_RS14925 (FORC54_2690)	zapB	2963060..2963302 (+)	243	WP_017789752.1	cell division protein ZapB	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36842.38 Da
• Isoelectric Point: 6.4904

>NTDB_id=213351 FORC54_RS14895 WP_011079334.1 2957433..2958440(+) (cytR) [Vibrio vulnificus strain FORC_054]
MATMKDVAQLAGVSTATVSRALMNPDKVSATTRKRVEDAVLEAGYSPNSLARNLRRNESRTIVAIVPDICDPYYTEIIRG
IEDAAIEQGYLVLLGDSGQQKRRESSLVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPDLELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPKSAALCQFRQQGYQQALRRAGITMNPQYCVESEFSFEGGAKAIRHLLEMNDAPTA
VFCHCDTMAIGAIQEAKKLGFRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDIHSGSRLLE
TKLVVRGSAAPPGLR

Nucleotide

• Length: 1008 bp

>NTDB_id=213351 FORC54_RS14895 WP_011079334.1 2957433..2958440(+) (cytR) [Vibrio vulnificus strain FORC_054]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGAGTTTCAACGGCAACGGTTTCGAGAGCGCTGATGAATCCAGACAA
AGTATCCGCCACAACGCGTAAGCGTGTGGAAGATGCGGTGTTGGAAGCTGGTTATTCCCCAAATTCGCTGGCACGCAATT
TACGCCGCAACGAGTCACGCACTATCGTCGCGATCGTTCCTGACATTTGTGATCCTTACTACACAGAGATCATTCGTGGC
ATTGAAGATGCCGCCATTGAGCAGGGATATTTGGTTCTACTCGGTGACAGCGGCCAACAAAAGCGCCGTGAAAGCTCACT
CGTCAATCTCGTTTTTACCAAGCAAGCGGATGGTATGCTACTGCTTGGTACTGACTTACCTTTTGATGTGAGCAAGCCAG
AACAGAAAAATCTTCCTCCGATGGTCATGGCTTGCGAGTTCGCCCCCGACCTCGAACTGCCGACGGTTCATATCGATAAC
TTGACCTCTGCCTTTGAAGCGGTGAACTACCTGACTCAACTGGGCCACAAACGCATCGCCCAAATTTCAGGGCCAAAATC
CGCAGCACTTTGTCAGTTTAGACAACAAGGCTATCAACAAGCTTTGCGCCGTGCCGGCATCACAATGAACCCACAATATT
GTGTTGAGTCTGAGTTCTCTTTTGAAGGTGGGGCGAAAGCGATCCGTCATCTGCTAGAAATGAATGATGCGCCAACCGCC
GTCTTCTGTCATTGTGACACCATGGCTATCGGGGCGATTCAAGAAGCGAAAAAATTGGGCTTCCGAGTACCCCAGGATCT
GTCGATTGTCGGCTTCGATGACATCCAGTTCGCCCAATATTGCGATCCTCCGCTAACCACCATCTCACAACCACGCTATG
AGATTGGTCGTCAAGCGATGCTAATGATGTTAGAGCTGCTGAAAGGGCATGACATTCACAGTGGCTCACGCCTACTTGAA
ACCAAATTGGTGGTTCGTGGTAGCGCAGCGCCTCCGGGCTTACGCTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	89.759	99.104	0.89
cytR	Vibrio cholerae C6706	88.253	99.104	0.875