Detailed information NTG0213331

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: FORC54_RS13375
• Genome accession: NZ_CP019121
• Coordinates: 2635520..2638909 (+)
• Length: 1129 a.a.
• NCBI ID: WP_039468593.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_054
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2630520..2643909

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC54_RS13355 (FORC54_2418)	erpA	2630919..2631260 (-)	342	WP_011079598.1	iron-sulfur cluster insertion protein ErpA	-
FORC54_RS13360 (FORC54_2419)	hemL	2631547..2632842 (+)	1296	WP_026060813.1	glutamate-1-semialdehyde 2,1-aminomutase	-
FORC54_RS13365 (FORC54_2420)	-	2633092..2634177 (+)	1086	WP_038941396.1	AI-2E family transporter	-
FORC54_RS13370 (FORC54_2421)	rsmC	2634251..2635273 (+)	1023	WP_101958930.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
FORC54_RS13375 (FORC54_2422)	chiS	2635520..2638909 (+)	3390	WP_039468593.1	response regulator	Regulator
FORC54_RS13380 (FORC54_2423)	-	2639850..2641523 (+)	1674	WP_080526779.1	ABC transporter substrate-binding protein	-
FORC54_RS13385 (FORC54_2424)	-	2641692..2642678 (+)	987	WP_011079592.1	ABC transporter permease	-
FORC54_RS13390 (FORC54_2425)	-	2642681..2643706 (+)	1026	WP_080526780.1	ABC transporter permease	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127491.47 Da
• Isoelectric Point: 5.8924

>NTDB_id=213331 FORC54_RS13375 WP_039468593.1 2635520..2638909(+) (chiS) [Vibrio vulnificus strain FORC_054]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSYVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAGLTDVGTYINSSGEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVQTASDGPETLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQFDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILEHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=213331 FORC54_RS13375 WP_039468593.1 2635520..2638909(+) (chiS) [Vibrio vulnificus strain FORC_054]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGCACTCTGATGACTGCGTTTTTGGTGCTGAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAGCAAAGCACTTCTCACCTGCTTT
CTGTTCGAGACACCAAGCAACAACAGATCCTAGATTATTTCCAAGCACAAGAAACGGAAGTGATGGGATTTGTTCGTTCA
GAGTTGGCTTACGCGAGTGGTGGCCGATTTTACGGGCTTGTCAACGCCTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TAGAGAAAACGCTCAGCAGCGCTATATTCAGGGATCTGGCGATCAAATAAAAACGTCGATTTTGCCGGAATCCAGCTCTT
ATGTCGGTAGTGAACGTTACCGTTTGCTGCATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGATCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAGGGGCCTTTTAAAGAGAGTATGCTCGGCAAAAGCTTCCGTCAATTGGCCAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCCGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGAGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCGAACAATGGCATCACCAAACTGATTGCAGACATCAA
TAAAGATGCGGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACTATGACCACAAAGCAAACCGATATAG
AAAGCAGTATTGAAGTGGTCGATAAGGCACTCGCGGGACTCACGGATGTCGGGACTTATATCAACAGCAGCGGAGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAAGGTCAAACCTGGGCTTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCCATGTTGATTGCGATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCTGGTGATCTCGATGAA
AACATGATTAATACAGAGCGCAAAGACGAAATAGGCCGTTTAGCAATCAGTTTTGAACGAATGCAACGCTCGATTCGCGA
TAAAATTCAGCTCATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAACTGATTCAAAAGCAAAACGACGAATTGC
AATTGGCTGATAAGCTCAAAGATGAATTTTTGGCAACTACCTCTCATGAGCTACGCACTCCACTGCATGGCATGATTGGT
ATTGCAGAAACCCTCATCTCAGGGGCAAACGGCCCACTGCCCTCTAACCAGCGCTATCAACTGGACATTATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTCGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAAT
CCGCCGTCAATTTGGCCAGTGCAACTCGACTGGTATTGGAGCTGTCTCACCACTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCTGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAACGCGATCAAATACACCACTGAAGGTAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGTATTCCAGCAGAACAATTAGAGCATATTTTCGAACCGCTCATTCAAGCTGGTCGAGACTCTGGT
CGTTATCGCCAAGGTGCAGGTCTGGGGCTTTCCATTAGCCGCCAACTGATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCTATGGTTGGCACCACCTTTAGCTTCACCTTGCCATTGGCCAGCGCAGACGAAATCAGCGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCACCAGATAGCAATGAATTGATCTCATTAGATAATTCCTCACTGCCAGAGAATCCC
AATGGCCCGCTACTGATTGTGGCCGATGATGAACCCGTCAACTTACGCGTGCTTGAAAGTTTCCTACGCATCGAAGGGTA
CCGAGTGCAAACGGCCTCAGATGGCCCAGAAACACTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGTTGCTCGACA
TCATGATGCCGGGTATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATTCGACATGGCAGAGTTGCCTATTATC
ATGCTAACAGCGTTGAGTCAGAGCGAAGATCGCGTGCGAGGATTCGAAGCTGGGGCCAATGATTACTTAACCAAGCCATT
TAATAAGCAAGAGCTTGCGGCCCGAATCAAAGCACATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTGGAAAACAATC
GCCTTGAAGCGGAGCTTCGCCAACGTGCAATGGTGGAAGCGAGCTTACTGGAAACACAAGGGCGTTTATTAGAACAATTG
GAGTCGGCCCCAGAAGCCATCATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGCAGCTTAGAGCAGCTCAAGCGATCAAACGCAGAAGAACTTATTGCTCCCAAATATTTAACCGTCAAACAGCAGC
ATTATTGCGGCAATATCGATATCTATGTCGACGATGTTCGACAGCATATTGAAACGGACATCCTTAAATTACCAGAAGGG
TCTGGCCTTGATGCGATGTTTATCTTTAATGTCGGAGGAGGCGCTGCTGCTTCTCGTGTGCACAACCTAGAAACCGCCGT
GGAAGTCCTTTCAAGCTATGCCTTTGATGGTGACAAAGAGCGCTTACAAAGCCTCAAAGAGCTAGGGGGAGAATTTACTC
GCCTGGCAGACAAAGCGCTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTCCTCGTGGATTTGATGACGCAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAATTTACCTTTGCTGAACAAAGTGGTTTATGGCGCGTTTATCT
CGACCGCAGCACGCTACAAACTCGCACACTTGATAAATACATGCGAATTGAAACCTTGCCAAAAACGCCTCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTGGAGCACTGTAAAGAGCAAAGTCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• PAS fold (PAS) (877-926)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-837)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.236	100	0.772