Detailed information NTG0213265

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: BV404_RS02140
• Genome accession: NZ_CP019118
• Coordinates: 455952..459341 (-)
• Length: 1129 a.a.
• NCBI ID: WP_075988171.1
• Uniprot ID: -
• Organism: Vibrio fluvialis strain 12605
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 450952..464341

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BV404_RS02125	-	451408..452433 (-)	1026	WP_020332022.1	ABC transporter permease	-
BV404_RS02130	-	452436..453422 (-)	987	WP_044363926.1	ABC transporter permease	-
BV404_RS02135	-	453588..455258 (-)	1671	WP_020332024.1	ABC transporter substrate-binding protein	-
BV404_RS02140	chiS	455952..459341 (-)	3390	WP_075988171.1	response regulator	Regulator
BV404_RS02145	rsmC	459546..460568 (-)	1023	WP_075988172.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
BV404_RS02150	-	460653..461738 (-)	1086	WP_024373684.1	AI-2E family transporter	-
BV404_RS22845	-	461775..461933 (+)	159	WP_155761249.1	hypothetical protein	-
BV404_RS02155	hemL	462003..463295 (-)	1293	WP_075988173.1	glutamate-1-semialdehyde 2,1-aminomutase	-
BV404_RS02160	erpA	463604..463945 (+)	342	WP_020332030.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127797.37 Da
• Isoelectric Point: 6.4051

>NTDB_id=213265 BV404_RS02140 WP_075988171.1 455952..459341(-) (chiS) [Vibrio fluvialis strain 12605]
MFRFNRKQKFKRLQNTLMLAFLVLSITPLTVTAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQVIDYLTAKESEVMGFVRS
ELAYASGGRFYGLVNAFQRLGVDIDQAREHAQQRYVPGSGDQIKTSVLPESSSYVGSERYRLLHKRYHWAYMELLKRSDF
DDILLVDINGNVVYSIFKNANYGTNLLTGKFKDSNLGQTFRQLEQQVSEHRKTNEDYTPVVLSDFVDENGRQYAWMGAPI
IQQGYLHSYAMFRLPNNGITKLIADTNSTSSMRTLLVGQDHRSRTLAYEQPEIDKSTQVIDWALNGSRSVGTYTNQAGEK
TIAAYAPINLKDLHWALVVELPEKEAFARVRQLEKLFIFAMLTAIILVVIASHYLSNFITSPLLKLTWAAERVSAGDLDE
TMINTDRRDEIGRLAVSFERMQRSIREKMQLIKAQNKELESNIQVIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIG
IAEALISGANGPINAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGNLDINTTAVNLSNATRLVLELSNHLLGKKPIRI
INQVAENPVWVSADAQRLEQVLYNLIGNAIKYTSEGKIVISANQVDNHIRVQVVDTGQGIPAEQLEHIFEPLIQAGHDTS
RYRQGAGLGLSISRQLIELMRGSLYVSSQPMVGTTFSFTLPIASEQEIAAAQLTQLPHFQAPEFTELDLPENHSIPENPN
GPLLLVADDEPVNLRVLDSFLRLEGYRVRTAQDGNEVLKAVAEEKPELLLLDIMMPGMSGYQVCEELRKTYDHAQLPVIM
LTALNQTDDRVRGFEAGANDYLSKPFNKQELAARIIAHLTASKAEQRRIENAELQKELKHRAMVEASLLETQGRLLEQLE
SAPEAIVCIREDHKIRFANEAASRLFKRSQEQIKRSNADELIAPKYLLVEQDHYCGNVDIFVDDIRQHVNADVLRLPEGA
GLQAMYIFNVGGSINAARIHNLETAVEALSSYAFEGDKDKLQQLKELGGEFTRLADKASGDSQSKQDLMRAVLVDAMTSA
LNYWEKVSGQSKFTFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLNSLDYILDHCQEQGPERTYIEVQRD
KLQKLLTSE

Nucleotide

• Length: 3390 bp

>NTDB_id=213265 BV404_RS02140 WP_075988171.1 455952..459341(-) (chiS) [Vibrio fluvialis strain 12605]
ATGTTTAGGTTCAATCGGAAGCAAAAGTTTAAGCGCCTGCAGAATACTCTTATGCTGGCGTTCCTGGTTCTCAGCATCAC
CCCTCTGACGGTGACGGCAATCTTTTTCCTTCAATCTCACAGTAAAGACTTGCAGGAACAAAGCACATCACATCTTCTGT
CAGTACGGGATACCAAACAACAGCAAGTAATCGACTACCTCACGGCTAAAGAGTCTGAAGTGATGGGCTTTGTCCGCTCA
GAACTTGCTTACGCCAGTGGCGGTCGCTTCTATGGATTGGTTAACGCATTTCAACGCTTGGGAGTCGATATCGATCAGGC
GCGCGAGCATGCGCAGCAACGTTATGTGCCCGGTTCCGGCGACCAAATCAAAACCTCCGTGTTACCAGAGTCGAGCAGTT
ACGTCGGCAGCGAACGCTATCGCTTGTTGCATAAACGCTACCATTGGGCGTATATGGAACTGCTTAAGCGATCCGATTTT
GACGATATTCTGTTGGTCGATATCAACGGCAACGTGGTGTATTCCATTTTTAAAAATGCCAACTACGGCACCAACCTGCT
GACGGGCAAATTTAAAGACAGTAATCTGGGTCAAACCTTTCGCCAACTAGAACAGCAGGTCAGCGAACACCGTAAAACCA
ATGAAGATTACACCCCTGTCGTACTGTCTGATTTTGTTGATGAAAATGGCCGTCAATATGCATGGATGGGCGCACCAATC
ATTCAGCAAGGCTACTTGCACAGTTATGCGATGTTCCGCCTGCCCAATAATGGCATTACCAAGCTGATTGCAGATACCAA
CAGCACCTCTTCAATGCGCACTCTGTTGGTCGGCCAGGATCATCGCTCGCGTACCCTCGCCTACGAGCAACCTGAGATCG
ATAAGAGTACTCAAGTGATTGATTGGGCGCTGAACGGCAGTCGTTCTGTTGGCACTTATACTAATCAGGCCGGGGAAAAA
ACCATTGCCGCCTACGCCCCTATCAACCTCAAAGATTTGCATTGGGCACTGGTGGTTGAACTACCAGAAAAAGAGGCCTT
TGCGCGCGTTCGTCAGTTGGAGAAGCTGTTCATCTTCGCCATGCTGACCGCAATTATTTTGGTGGTGATCGCCTCACATT
ATCTGTCTAACTTCATTACATCTCCGCTCCTTAAACTGACCTGGGCAGCGGAACGTGTCTCCGCTGGCGACTTGGATGAA
ACCATGATCAACACCGATCGACGTGATGAAATTGGTAGGTTGGCGGTGAGTTTTGAACGTATGCAACGCTCTATTCGCGA
GAAGATGCAACTGATTAAGGCGCAGAATAAAGAGTTGGAAAGCAATATTCAGGTCATTCGTAAACAGAACGATGAATTGC
AGTTGGCCAACAAACTGAAAGATGAGTTTCTTGCCACAACTTCGCATGAACTCAGAACGCCCTTACATGGCATGATCGGT
ATTGCCGAGGCGCTGATTTCCGGCGCCAATGGCCCAATTAATGCAGCACACAAGTATCAGCTCGACATTATCATCAGTAG
CGGTCAACGACTGGCCACCTTGGTGGATGACTTGCTCGACTACCACAAGATGCGCTACGGCAATCTCGACATCAACACGA
CTGCCGTTAATCTGTCCAATGCCACTCGTTTGGTGCTCGAACTGTCTAATCATCTGTTGGGCAAAAAGCCAATCCGCATT
ATTAACCAAGTCGCCGAAAATCCGGTGTGGGTATCTGCCGATGCCCAGCGTTTGGAGCAAGTGTTGTACAACCTGATCGG
CAACGCTATCAAATACACCTCGGAAGGTAAGATTGTCATCTCAGCCAATCAAGTGGATAACCATATTCGCGTTCAGGTCG
TGGATACCGGCCAAGGCATTCCGGCCGAACAGCTGGAACACATTTTTGAACCTCTGATTCAAGCCGGACATGACACCAGT
CGCTATCGTCAGGGCGCAGGACTGGGGCTATCCATCAGCCGTCAATTAATTGAGTTGATGCGTGGCTCGCTGTATGTCAG
CAGCCAACCTATGGTTGGCACTACCTTTAGTTTCACCCTGCCAATCGCGTCAGAACAAGAGATTGCTGCCGCACAACTGA
CTCAGCTACCCCATTTCCAGGCTCCTGAATTTACGGAACTGGATCTGCCTGAGAATCATAGCATCCCGGAAAATCCGAAC
GGCCCACTGCTGTTAGTCGCGGATGATGAGCCGGTTAACTTACGTGTTCTGGACAGCTTCCTTCGTTTAGAAGGCTATCG
TGTACGCACCGCACAGGATGGCAATGAAGTGTTGAAAGCTGTGGCTGAAGAGAAACCGGAGCTGCTATTGCTCGACATCA
TGATGCCCGGAATGAGTGGTTATCAGGTTTGTGAAGAGCTGCGTAAAACGTATGATCACGCTCAATTACCGGTAATTATG
CTGACCGCTTTGAACCAAACCGACGATCGCGTACGAGGCTTTGAAGCGGGTGCCAACGACTACCTGTCCAAACCTTTCAA
CAAACAGGAACTGGCTGCACGTATTATCGCGCACCTGACAGCGAGCAAAGCAGAACAACGTCGGATTGAAAACGCCGAGT
TGCAGAAAGAATTGAAGCACCGTGCGATGGTTGAGGCTAGTCTGCTGGAAACGCAAGGCCGTTTGTTGGAACAGCTGGAA
TCTGCACCGGAAGCCATTGTTTGTATTCGTGAAGATCACAAAATCCGCTTTGCCAATGAAGCCGCTTCGCGCCTGTTTAA
ACGTAGTCAGGAGCAAATCAAGCGCTCTAACGCAGATGAGTTGATCGCTCCGAAGTATCTGCTGGTCGAGCAGGATCATT
ATTGTGGCAACGTCGATATTTTTGTCGATGATATTCGGCAACACGTCAACGCTGATGTCCTCCGCCTGCCGGAAGGCGCT
GGATTACAGGCAATGTATATCTTTAATGTGGGTGGCAGCATTAACGCTGCGCGTATTCATAATCTTGAAACGGCCGTTGA
AGCCCTATCGAGCTATGCCTTTGAAGGCGACAAGGATAAGCTGCAGCAACTCAAAGAACTGGGGGGAGAATTTACCCGCC
TGGCGGACAAAGCCTCAGGCGACAGTCAATCTAAGCAGGACTTGATGCGCGCCGTCTTGGTGGATGCGATGACGTCAGCC
CTCAACTATTGGGAGAAAGTCTCCGGGCAAAGCAAATTCACGTTCGCAGAACAAAGTGGGTTATGGCGCGTCTATCTGGA
CCGAAGCACGCTGCAGACCCGCACACTCGACAAGTATCTGCGTATCGAAACACTGCCTAAAACACCGCGGTGGCGCACGG
TACTCAATTCGCTGGATTACATTCTCGACCACTGTCAGGAGCAGGGGCCTGAACGTACCTACATTGAAGTACAACGCGAC
AAACTGCAAAAGCTGCTCACCTCTGAATAA

Domains

Predicted by InterproScan.

• HAMP domain (HAMP) (375-427)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-682)

• Response regulator receiver domain (Response_reg) (725-835)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	84.765	100	0.848