Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   NP7_RS14000 Genome accession   NZ_CP024443
Coordinates   2001013..2001156 (-) Length   47 a.a.
NCBI ID   WP_156627504.1    Uniprot ID   -
Organism   Moraxella osloensis strain NP7     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1996013..2006156
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP7_RS08875 (NP7_08870) efp 1996095..1996667 (+) 573 WP_100270522.1 elongation factor P -
  NP7_RS08880 (NP7_08875) - 1996970..1998199 (+) 1230 WP_100270523.1 toxic anion resistance protein -
  NP7_RS08885 (NP7_08880) - 1998265..1999428 (-) 1164 WP_100270891.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  NP7_RS08890 (NP7_08885) - 1999578..1999883 (-) 306 WP_083102070.1 hypothetical protein -
  NP7_RS08895 (NP7_08890) - 2000232..2000870 (-) 639 WP_100270524.1 MarC family protein -
  NP7_RS14000 comA/nlmT 2001013..2001156 (-) 144 WP_156627504.1 hypothetical protein Regulator
  NP7_RS08900 (NP7_08895) - 2001311..2003131 (+) 1821 WP_100270525.1 acyl-CoA dehydrogenase C-terminal domain-containing protein -
  NP7_RS08905 (NP7_08900) - 2003233..2004138 (+) 906 WP_227523063.1 polyprenyl synthetase family protein -
  NP7_RS08910 (NP7_08905) - 2004139..2004786 (-) 648 WP_100270527.1 RDD family protein -

Sequence

Protein


Download         Length: 47 a.a.        Molecular weight: 5475.10 Da        Isoelectric Point: 4.8565

>NTDB_id=212910 NP7_RS14000 WP_156627504.1 2001013..2001156(-) (comA/nlmT) [Moraxella osloensis strain NP7]
MVIEQGRVVETGTHDELYRKQGKYYEIFNAMSDSLNLDKITQTLDSH

Nucleotide


Download         Length: 144 bp        

>NTDB_id=212910 NP7_RS14000 WP_156627504.1 2001013..2001156(-) (comA/nlmT) [Moraxella osloensis strain NP7]
GTGGTCATCGAGCAAGGGCGCGTGGTGGAGACAGGCACGCATGATGAACTGTATCGCAAGCAAGGCAAATACTATGAGAT
TTTTAATGCCATGTCCGATAGTTTAAATCTTGATAAAATCACCCAAACGTTAGACAGCCATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

58.621

61.702

0.362