Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilH   Type   Machinery gene
Locus tag   NP7_RS09820 Genome accession   NZ_CP024443
Coordinates   2206871..2207233 (-) Length   120 a.a.
NCBI ID   WP_036592735.1    Uniprot ID   A0A0X8K6G7
Organism   Moraxella osloensis strain NP7     
Function   type IV pilus biogenesis and function (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2201871..2212233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP7_RS14015 - 2204434..2204607 (-) 174 WP_158522021.1 hypothetical protein -
  NP7_RS09810 (NP7_13140) - 2204875..2205906 (-) 1032 Protein_1910 methyl-accepting chemotaxis protein -
  NP7_RS09815 (NP7_13145) - 2206329..2206865 (-) 537 WP_100270653.1 chemotaxis protein CheW -
  NP7_RS09820 (NP7_13150) pilH 2206871..2207233 (-) 363 WP_036592735.1 response regulator Machinery gene
  NP7_RS09825 (NP7_13155) pilG 2207469..2207855 (-) 387 WP_036592734.1 twitching motility response regulator PilG Regulator
  NP7_RS09830 (NP7_13160) - 2208343..2209590 (+) 1248 WP_199488862.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 120 a.a.        Molecular weight: 13700.74 Da        Isoelectric Point: 5.6757

>NTDB_id=212905 NP7_RS09820 WP_036592735.1 2206871..2207233(-) (pilH) [Moraxella osloensis strain NP7]
MAKILVVDDSPSEMAKFRDILTRHQYEVIEAHTGDDGIQKANEFFPDVILMDVVMPEMNGFQATRKLTRDPKTSHIPVVI
ISTKNQETDRVWGKRQGARDYLSKPITEEALITVIRSVME

Nucleotide


Download         Length: 363 bp        

>NTDB_id=212905 NP7_RS09820 WP_036592735.1 2206871..2207233(-) (pilH) [Moraxella osloensis strain NP7]
ATGGCCAAAATCTTAGTAGTTGATGATTCACCATCAGAAATGGCAAAATTTCGGGATATTTTGACCCGTCATCAGTACGA
AGTCATTGAAGCGCATACAGGCGATGATGGGATTCAAAAAGCCAATGAGTTTTTCCCAGACGTGATTTTGATGGATGTGG
TCATGCCAGAGATGAACGGCTTTCAAGCGACCCGCAAACTCACCCGTGACCCAAAAACCAGTCATATCCCTGTCGTCATC
ATCAGTACTAAAAATCAAGAAACTGACCGGGTATGGGGCAAGCGCCAAGGCGCACGAGATTATCTAAGTAAGCCGATTAC
AGAAGAAGCCTTAATCACTGTAATCCGTTCCGTGATGGAGTAG

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0X8K6G7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilH Synechocystis sp. PCC 6803

38.655

99.167

0.383

Multiple sequence alignment