Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   NP7_RS07435 Genome accession   NZ_CP024443
Coordinates   1672032..1672484 (-) Length   150 a.a.
NCBI ID   WP_199488844.1    Uniprot ID   -
Organism   Moraxella osloensis strain NP7     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1667032..1677484
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NP7_RS07420 (NP7_07415) - 1667811..1669610 (-) 1800 WP_100270314.1 PglL family O-oligosaccharyltransferase -
  NP7_RS07425 (NP7_07420) - 1669708..1671135 (-) 1428 WP_100270315.1 O-antigen ligase family protein -
  NP7_RS07430 (NP7_07425) comP 1671223..1671651 (-) 429 WP_100270316.1 pilin Machinery gene
  NP7_RS07435 (NP7_07430) pilE 1672032..1672484 (-) 453 WP_199488844.1 type IV pilin protein Machinery gene
  NP7_RS07440 (NP7_07435) - 1672478..1673047 (-) 570 WP_100270318.1 type IV pilin protein -
  NP7_RS07445 (NP7_07440) - 1673058..1677302 (-) 4245 WP_100270319.1 pilus assembly protein PilY -

Sequence

Protein


Download         Length: 150 a.a.        Molecular weight: 16421.60 Da        Isoelectric Point: 7.7733

>NTDB_id=212893 NP7_RS07435 WP_199488844.1 1672032..1672484(-) (pilE) [Moraxella osloensis strain NP7]
MVMKNRYSQQGFTLIELMIVVAIIGILAAIAYPSYQRYVIKTKRTDMMAEMQNIASQIESRKLAQGSYTNAGTGLNGSFP
RSGTALYTITLAPTPLTERWTITATPVSSSQMANDGRLTLNAQGLKCRDKNNDGDTQDTGECGTGEEWNN

Nucleotide


Download         Length: 453 bp        

>NTDB_id=212893 NP7_RS07435 WP_199488844.1 1672032..1672484(-) (pilE) [Moraxella osloensis strain NP7]
ATGGTAATGAAAAATCGATATAGTCAACAAGGCTTTACCCTAATCGAGCTGATGATAGTGGTTGCTATCATCGGTATATT
GGCGGCGATTGCGTATCCAAGCTATCAGCGCTATGTCATCAAGACCAAACGCACCGATATGATGGCAGAAATGCAAAATA
TCGCCTCGCAAATTGAATCGCGTAAACTGGCACAAGGCAGTTACACTAACGCAGGGACGGGATTAAATGGGAGCTTCCCT
AGAAGTGGTACAGCATTATATACCATCACCCTAGCACCCACCCCCCTCACTGAACGTTGGACAATTACAGCGACACCTGT
TAGTTCATCGCAGATGGCAAATGATGGTAGACTTACGCTAAACGCGCAAGGGCTCAAATGTCGCGATAAAAATAATGATG
GCGATACCCAAGATACAGGCGAATGTGGTACGGGTGAAGAATGGAATAACTAG

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(8-32)

Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS)

(33-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Acinetobacter baumannii D1279779

50

82.667

0.413
  comF Acinetobacter baylyi ADP1

48.8

83.333

0.407
  comE Acinetobacter baylyi ADP1

31.25

100

0.367