Detailed information NTG0212817

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BVL33_RS10495
• Genome accession: NZ_CP019041
• Coordinates: 2156139..2156867 (-)
• Length: 242 a.a.
• NCBI ID: WP_228144192.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain 65
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2151139..2161867

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVL33_RS10465 (BVL33_10465)	-	2151589..2152029 (-)	441	WP_075696895.1	SRPBCC family protein	-
BVL33_RS10470 (BVL33_10470)	tadA	2152097..2152600 (-)	504	WP_005402545.1	tRNA adenosine(34) deaminase TadA	-
BVL33_RS10475 (BVL33_10475)	-	2152607..2153731 (-)	1125	WP_171053792.1	enoyl-CoA hydratase/isomerase family protein	-
BVL33_RS10480 (BVL33_10480)	ung	2153728..2154441 (-)	714	WP_075696551.1	uracil-DNA glycosylase	-
BVL33_RS10485 (BVL33_10485)	-	2154480..2155076 (-)	597	WP_004954093.1	6-pyruvoyl trahydropterin synthase family protein	-
BVL33_RS10490 (BVL33_10490)	gspK	2155183..2156142 (-)	960	WP_075696552.1	type II secretion system minor pseudopilin GspK	-
BVL33_RS10495 (BVL33_10495)	xcpW	2156139..2156867 (-)	729	WP_228144192.1	type II secretion system protein GspJ	Machinery gene
BVL33_RS10500 (BVL33_10500)	xcpV	2156864..2157217 (-)	354	WP_042106585.1	type II secretion system protein	Machinery gene
BVL33_RS10505 (BVL33_10505)	-	2157351..2157899 (-)	549	WP_005402541.1	pilus assembly FimT family protein	-
BVL33_RS10510 (BVL33_10510)	-	2157912..2158520 (-)	609	WP_020899852.1	TetR/AcrR family transcriptional regulator	-
BVL33_RS10515 (BVL33_10515)	-	2158559..2159332 (-)	774	WP_005402540.1	TatD family hydrolase	-
BVL33_RS10520 (BVL33_10520)	-	2159355..2159699 (-)	345	WP_005402539.1	PilZ domain-containing protein	-
BVL33_RS10525 (BVL33_10525)	-	2159926..2160912 (-)	987	WP_075696553.1	DNA polymerase III subunit delta'	-
BVL33_RS10530 (BVL33_10530)	kdsB	2160914..2161675 (-)	762	WP_075696554.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 242 a.a.
• Molecular weight: 28074.43 Da
• Isoelectric Point: 9.0888

>NTDB_id=212817 BVL33_RS10495 WP_228144192.1 2156139..2156867(-) (xcpW) [Acinetobacter junii strain 65]
MKIKNVVMRLGFRFNVVSECQQSSTKSYLPKKIKSNLGFTLVELLVAIAIFAVLSMLGWKVFDYLIKVKDRNAEHETHLF
ELQDAYQQFLKDSMQIIPLTANDGRQLQAAMVLNDRSFSFSKAWVSDPLKQDLSPYERIEYRYDAQQKKVYRLKYTNLNI
PNRVQPVSSTLLENVDQFRILILNPQEISQWPENINDPNNVNELKKLPLGFKVQLTIAGSDYEWIYSLLNANQLLVNLET
PP

Nucleotide

• Length: 729 bp

>NTDB_id=212817 BVL33_RS10495 WP_228144192.1 2156139..2156867(-) (xcpW) [Acinetobacter junii strain 65]
ATGAAAATCAAGAATGTTGTAATGAGGTTGGGTTTCAGATTTAATGTTGTCTCAGAATGTCAGCAAAGTTCAACTAAGTC
TTATTTACCTAAAAAAATTAAGAGTAATTTAGGTTTTACTTTAGTTGAGTTGCTTGTTGCGATTGCGATATTTGCAGTGC
TTTCAATGTTGGGGTGGAAAGTTTTTGATTATCTCATCAAAGTGAAAGATAGAAATGCAGAACATGAAACACACTTATTT
GAATTACAGGATGCTTATCAGCAATTTTTAAAAGATAGCATGCAGATAATTCCATTGACTGCAAATGATGGGCGACAATT
ACAAGCAGCTATGGTTTTGAATGATCGAAGTTTTAGTTTTAGTAAGGCTTGGGTATCTGATCCATTGAAGCAAGATCTTT
CACCATATGAGCGAATAGAATACAGATATGATGCGCAACAAAAAAAAGTTTACCGTTTGAAATATACAAATTTAAATATT
CCAAATCGTGTGCAACCAGTATCAAGCACTTTACTTGAAAATGTAGATCAATTTAGAATTTTGATTTTAAATCCACAAGA
AATTAGCCAATGGCCTGAAAATATTAATGATCCAAATAATGTAAATGAATTAAAGAAGTTACCATTAGGTTTTAAAGTTC
AATTGACGATTGCTGGTTCAGATTATGAGTGGATTTATAGTTTATTAAATGCCAATCAGTTATTGGTCAATCTGGAAACT
CCACCATGA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (91-219)

• Prokaryotic N-terminal methylation motif (N_methyl) (34-57)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	71.204	78.926	0.562