Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   BVH55_RS21195 Genome accession   NZ_CP019040
Coordinates   381803..381967 (+) Length   54 a.a.
NCBI ID   WP_269195014.1    Uniprot ID   -
Organism   Bacillus velezensis strain GH1-13     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 376803..386967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVH55_RS21190 srfAB 378691..381786 (+) 3096 Protein_320 surfactin non-ribosomal peptide synthetase SrfAB -
  BVH55_RS21195 comS 381803..381967 (+) 165 WP_269195014.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6238.22 Da        Isoelectric Point: 11.7559

>NTDB_id=212791 BVH55_RS21195 WP_269195014.1 381803..381967(+) (comS) [Bacillus velezensis strain GH1-13]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKDQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=212791 BVH55_RS21195 WP_269195014.1 381803..381967(+) (comS) [Bacillus velezensis strain GH1-13]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGAAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGATC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

58.696

85.185

0.5

Multiple sequence alignment