Detailed information NTG0212782

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BVH55_RS17895
• Genome accession: NZ_CP019040
• Coordinates: 3528168..3529331 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain GH1-13
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3523168..3534331

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BVH55_RS17865 (BVH55_17900)	-	3523433..3523852 (-)	420	WP_043867469.1	TIGR03826 family flagellar region protein	-
BVH55_RS17870 (BVH55_17905)	comFC	3523926..3524615 (-)	690	WP_202980098.1	phosphoribosyltransferase family protein	Machinery gene
BVH55_RS17875 (BVH55_17910)	-	3524621..3524905 (-)	285	WP_017418816.1	competence protein ComFB	-
BVH55_RS17880 (BVH55_17915)	comFA	3524963..3526348 (-)	1386	WP_077722929.1	DEAD/DEAH box helicase	Machinery gene
BVH55_RS17885 (BVH55_17920)	-	3526456..3527304 (-)	849	WP_003151387.1	DegV family protein	-
BVH55_RS17890 (BVH55_17925)	degU	3527402..3528091 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BVH55_RS17895 (BVH55_17930)	degS	3528168..3529331 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
BVH55_RS17900 (BVH55_17935)	-	3529554..3530201 (+)	648	WP_060657503.1	YigZ family protein	-
BVH55_RS17905 (BVH55_17940)	-	3530206..3531420 (+)	1215	WP_070082459.1	LCP family protein	-
BVH55_RS17910 (BVH55_17945)	-	3531510..3532586 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
BVH55_RS17915 (BVH55_17950)	-	3532719..3533915 (-)	1197	WP_077722930.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=212782 BVH55_RS17895 WP_003151385.1 3528168..3529331(-) (degS) [Bacillus velezensis strain GH1-13]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=212782 BVH55_RS17895 WP_003151385.1 3528168..3529331(-) (degS) [Bacillus velezensis strain GH1-13]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948