Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BVH55_RS07340 Genome accession   NZ_CP019040
Coordinates   1362012..1362476 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain GH1-13     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1357012..1367476
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVH55_RS07320 (BVH55_07340) - 1357492..1359312 (+) 1821 WP_003154628.1 PAS domain-containing protein -
  BVH55_RS07325 (BVH55_07345) - 1359338..1360507 (-) 1170 WP_070081738.1 aminotransferase A -
  BVH55_RS21030 - 1360708..1360869 (-) 162 WP_164672396.1 hypothetical protein -
  BVH55_RS07335 (BVH55_07355) cheV 1361058..1361969 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  BVH55_RS07340 (BVH55_07360) kre 1362012..1362476 (-) 465 WP_003154622.1 YkyB family protein Regulator
  BVH55_RS07345 (BVH55_07365) - 1362599..1363891 (-) 1293 WP_077722138.1 MFS transporter -
  BVH55_RS07350 (BVH55_07370) - 1363967..1364461 (-) 495 WP_088037173.1 L,D-transpeptidase family protein -
  BVH55_RS07355 (BVH55_07375) - 1364536..1365399 (-) 864 WP_077722139.1 metallophosphoesterase -
  BVH55_RS07360 (BVH55_07380) fadH 1365543..1366307 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  BVH55_RS07365 (BVH55_07385) - 1366418..1366966 (+) 549 WP_077722140.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=212743 BVH55_RS07340 WP_003154622.1 1362012..1362476(-) (kre) [Bacillus velezensis strain GH1-13]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=212743 BVH55_RS07340 WP_003154622.1 1362012..1362476(-) (kre) [Bacillus velezensis strain GH1-13]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment