Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   BVH55_RS06050 Genome accession   NZ_CP019040
Coordinates   1116056..1117009 (+) Length   317 a.a.
NCBI ID   WP_070081621.1    Uniprot ID   -
Organism   Bacillus velezensis strain GH1-13     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1111056..1122009
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVH55_RS06020 (BVH55_06035) argF 1112874..1113845 (+) 972 WP_071391999.1 ornithine carbamoyltransferase -
  BVH55_RS06025 (BVH55_06040) - 1113921..1114100 (+) 180 WP_003155070.1 YjzC family protein -
  BVH55_RS06030 (BVH55_06045) - 1114137..1114322 (-) 186 WP_032874447.1 YjzD family protein -
  BVH55_RS06040 (BVH55_06055) - 1114583..1115317 (+) 735 WP_077722050.1 hypothetical protein -
  BVH55_RS06045 (BVH55_06060) - 1115400..1115966 (+) 567 WP_077722051.1 hypothetical protein -
  BVH55_RS06050 (BVH55_06065) med 1116056..1117009 (+) 954 WP_070081621.1 BMP family ABC transporter substrate-binding protein Regulator
  BVH55_RS06055 (BVH55_06070) comZ 1117022..1117213 (+) 192 WP_003155061.1 ComZ family protein Regulator
  BVH55_RS06060 (BVH55_06075) - 1117243..1117461 (-) 219 WP_003155059.1 hypothetical protein -
  BVH55_RS06065 (BVH55_06080) - 1117629..1118567 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  BVH55_RS06070 (BVH55_06085) fabF 1118590..1119828 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  BVH55_RS06075 (BVH55_06090) - 1119912..1120697 (+) 786 WP_077722052.1 DUF2268 domain-containing protein -
  BVH55_RS06080 (BVH55_06095) - 1120871..1121857 (+) 987 WP_029325950.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35315.92 Da        Isoelectric Point: 4.5594

>NTDB_id=212735 BVH55_RS06050 WP_070081621.1 1116056..1117009(+) (med) [Bacillus velezensis strain GH1-13]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=212735 BVH55_RS06050 WP_070081621.1 1116056..1117009(+) (med) [Bacillus velezensis strain GH1-13]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTAGGTGTCATCGCCTCCTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACGGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785

Multiple sequence alignment