Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | AT570_RS04825 | Genome accession | NZ_CP019034 |
| Coordinates | 1031732..1032157 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788346.1 | Uniprot ID | A0A0J8T367 |
| Organism | Acinetobacter baumannii strain AB042 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1026732..1037157
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT570_RS04795 (AT570_04795) | - | 1027262..1028296 (+) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
| AT570_RS04800 (AT570_04800) | - | 1028411..1029352 (+) | 942 | WP_085943440.1 | lipase family alpha/beta hydrolase | - |
| AT570_RS04805 (AT570_04805) | rplS | 1029404..1029772 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AT570_RS04810 (AT570_04810) | trmD | 1029980..1030720 (-) | 741 | WP_000464596.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AT570_RS04815 (AT570_04815) | rimM | 1030766..1031314 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AT570_RS04820 (AT570_04820) | rpsP | 1031334..1031585 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AT570_RS04825 (AT570_04825) | pilE | 1031732..1032157 (-) | 426 | WP_000788346.1 | type IV pilin protein | Machinery gene |
| AT570_RS04830 (AT570_04830) | pilY2 | 1032154..1032636 (-) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| AT570_RS04835 (AT570_04835) | pilY1 | 1032649..1036503 (-) | 3855 | WP_000768958.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15282.50 Da Isoelectric Point: 7.8144
>NTDB_id=212633 AT570_RS04825 WP_000788346.1 1031732..1032157(-) (pilE) [Acinetobacter baumannii strain AB042]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNTTIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNTTIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=212633 AT570_RS04825 WP_000788346.1 1031732..1032157(-) (pilE) [Acinetobacter baumannii strain AB042]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCTTCAAATACAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCTTCAAATACAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
99.291 |
100 |
0.993 |
| comF | Acinetobacter baylyi ADP1 |
52.857 |
99.291 |
0.525 |