Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   BEI53_RS16065 Genome accession   NZ_CP018935
Coordinates   2948528..2949322 (+) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus cereus strain JEM-2     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 2943528..2954322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BEI53_RS16045 argR 2944367..2944816 (+) 450 WP_001032581.1 arginine repressor ArgR -
  BEI53_RS16050 recN 2945084..2946823 (+) 1740 WP_000947757.1 DNA repair protein RecN Machinery gene
  BEI53_RS16055 spoIVB 2946942..2948240 (+) 1299 WP_002037056.1 SpoIVB peptidase -
  BEI53_RS16065 spo0A 2948528..2949322 (+) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  BEI53_RS16070 - 2949618..2951144 (+) 1527 WP_075396408.1 hypothetical protein -
  BEI53_RS16075 - 2951312..2951458 (-) 147 WP_001247671.1 YycC family protein -
  BEI53_RS16080 - 2951509..2952237 (+) 729 WP_000172561.1 glycerophosphodiester phosphodiesterase -
  BEI53_RS16085 - 2952286..2952519 (-) 234 WP_001190187.1 DUF2627 domain-containing protein -

Sequence


Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=212207 BEI53_RS16065 WP_003161566.1 2948528..2949322(+) (spo0A) [Bacillus cereus strain JEM-2]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=212207 BEI53_RS16065 WP_003161566.1 2948528..2949322(+) (spo0A) [Bacillus cereus strain JEM-2]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAGCAGCCGGATGTACTCG
TATTGGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTCATATT
AAAACCATTTGATATGGAAAATTTAACGAGTCATATTCGTCAAGTGAGCGGTAAGGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAATTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGGTACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCTGAGTTTATTGCAATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTAGCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB P52928

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818


Multiple sequence alignment