Detailed information NTG0212160

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: BEI49_RS26390
• Genome accession: NZ_CP018933
• Coordinates: 4828977..4830326 (-)
• Length: 449 a.a.
• NCBI ID: WP_000879417.1
• Uniprot ID: A0AAE9TF02
• Organism: Bacillus cereus strain ISSFR-9F
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4823977..4835326

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BEI49_RS26365	secA	4824300..4826807 (-)	2508	WP_000579368.1	preprotein translocase subunit SecA	-
BEI49_RS26375	hpf	4827083..4827625 (-)	543	WP_000671189.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
BEI49_RS26380	cspC	4827949..4828146 (-)	198	WP_001990088.1	cold shock protein CspC	-
BEI49_RS26385	comFC	4828273..4828977 (-)	705	WP_075396217.1	comF operon protein ComFC	-
BEI49_RS26390	comFA	4828977..4830326 (-)	1350	WP_000879417.1	ATP-dependent helicase ComFA	Machinery gene
BEI49_RS26395	-	4830453..4831766 (-)	1314	WP_075396218.1	NlpC/P60 family protein	-
BEI49_RS26400	-	4832026..4832340 (-)	315	WP_000400857.1	winged helix-turn-helix transcriptional regulator	-
BEI49_RS26410	-	4832514..4833356 (-)	843	WP_000844766.1	DegV family protein	-
BEI49_RS26415	-	4833596..4834231 (+)	636	WP_000926690.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51233.89 Da
• Isoelectric Point: 9.5047

>NTDB_id=212160 BEI49_RS26390 WP_000879417.1 4828977..4830326(-) (comFA) [Bacillus cereus strain ISSFR-9F]
MLAGKQLLLEELPSDLRRELSDLKKEGEVICVQGVIKKASKYICQRCGNIEQRLFASFLCKRCSKVCTYCRKCITMGRVS
ECAVLVRGIHERKGERELHSLQWKGSLSLGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELVPRLQEVFPSINVAALYGGSVDREKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVQQAM
KEKAARIYLTATPDEKWKRNFRTGKQKGIIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMYVNKKYPIFL
FVPHVRYIEEIGLLLKGLDHRIDGVHAEDPMRKEKVEAFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVVYFHYGKTESMVRAKRHIQSMNKSAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=212160 BEI49_RS26390 WP_000879417.1 4828977..4830326(-) (comFA) [Bacillus cereus strain ISSFR-9F]
ATGCTCGCTGGAAAGCAGTTACTATTAGAAGAACTCCCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGGAGGG
AGAGGTCATATGTGTACAAGGCGTAATAAAGAAGGCTTCTAAATATATATGTCAGCGCTGCGGGAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCAGTAAAGTATGTACGTATTGCCGGAAGTGTATAACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGGATTCATGAAAGAAAAGGAGAAAGGGAATTACATTCGTTACAGTGGAAAGGGAGTTT
GTCTCTTGGTCAGGAGCTGGCGGCGCAAGGTGTTATAGAAGCTATTAAGCAAAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCACTTCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGTACCGAGATTACAAGAAGTGTTTCCAAGTATAAATGTAGCTGCTTTATACGG
AGGGAGTGTAGATCGTGAAAAAGATGCAGCGTTAGTCGTTGCAACGACGCATCAATTGTTACGTTATTATAGAGCGTTTC
ATGTAATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTGCAGCAAGCGATG
AAAGAGAAAGCAGCGCGTATTTATTTAACGGCAACCCCTGATGAAAAGTGGAAGCGCAATTTCAGAACGGGGAAACAAAA
AGGTATCATTGTCTCTGGACGATACCATCGTCATCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGTGTGTTACTACAATGGTTAAAAATGTACGTAAACAAAAAATACCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAGGCCTGTTATTGAAAGGGTTGGATCATAGAATCGATGGCGTACATGC
AGAAGATCCGATGAGAAAAGAAAAAGTGGAAGCGTTTAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGGGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGGGCTGAAGAAGAAATATTTTCAGAAAGTGCGCTTGTA
CAAATTGCAGGCCGAGCAGGTCGTAGTTTTGAAGAACCGTATGGTGAGGTTGTTTATTTTCATTACGGTAAGACAGAGTC
GATGGTACGTGCGAAAAGACATATTCAAAGTATGAACAAAAGTGCGAAAGAACAAGGATTAATTGATTAA

Domains

Predicted by InterproScan.

• Type III restriction enzyme, res subunit (ResIII) (108-254)

• Helicase conserved C-terminal domain (Helicase_C) (312-408)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	51.914	93.096	0.483
comFA	Latilactobacillus sakei subsp. sakei 23K	40.704	88.641	0.361