Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   BVD86_RS13045 Genome accession   NZ_CP018909
Coordinates   2705211..2707439 (+) Length   742 a.a.
NCBI ID   WP_101664170.1    Uniprot ID   -
Organism   Acinetobacter pittii strain XJ88     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2700211..2712439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVD86_RS13020 (BVD86_13070) lnt 2700661..2702220 (+) 1560 WP_101664169.1 apolipoprotein N-acyltransferase -
  BVD86_RS13025 (BVD86_13075) csaA 2702222..2702560 (-) 339 WP_002114937.1 tRNA-binding protein -
  BVD86_RS13030 (BVD86_13080) - 2702707..2703051 (-) 345 WP_002114661.1 hypothetical protein -
  BVD86_RS13035 (BVD86_13085) gspG 2703318..2703833 (-) 516 WP_019768050.1 type II secretion system major pseudopilin GspG -
  BVD86_RS13040 (BVD86_13090) gspF 2703857..2705062 (-) 1206 WP_005065941.1 type II secretion system inner membrane protein GspF -
  BVD86_RS13045 (BVD86_13095) priA 2705211..2707439 (+) 2229 WP_101664170.1 primosomal protein N' Machinery gene
  BVD86_RS13050 (BVD86_13100) kefB 2707516..2709360 (+) 1845 WP_101664171.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  BVD86_RS13055 (BVD86_13105) hslO 2709524..2710399 (+) 876 WP_017481969.1 Hsp33 family molecular chaperone HslO -
  BVD86_RS13060 (BVD86_13110) - 2710537..2711148 (+) 612 WP_101664172.1 LysE family translocator -
  BVD86_RS13065 (BVD86_13115) cbpA 2711295..2712251 (+) 957 WP_101664173.1 DnaJ C-terminal domain-containing protein -

Sequence

Protein


Download         Length: 742 a.a.        Molecular weight: 84010.75 Da        Isoelectric Point: 8.5603

>NTDB_id=211755 BVD86_RS13045 WP_101664170.1 2705211..2707439(+) (priA) [Acinetobacter pittii strain XJ88]
MTITPKPDSVVYRVRVAVPVHLYDTFDYTLTQAQYERAHVGSRVAISFGRQNLIGIITEKVDPSESFTGTFQLKAISDLL
DEQPILDEQVLSLLTWSAQYYQFPIGEVMQTALPALLRQGKPMDVLFHLWKITPCDNVEALLKRSVKQQDAYQILKLHPA
GTTENILNLSGVETATLKALQKKGLVDCTLEPHDFSPSPVQLAQMPLTLNEDQKKATQHVVNAQHQYQAFLLDGLTGSGK
TEVYLHIMHEVLKQGKQVLVLVPEIGLTPQTISRFKSRFNCDIALLHSGLNDSKRLQAWQQAQTGKASIILGTRSAIYTP
LPRLGLIILDEEHDLSYKQQEGFRYHARDVALYRGHLQNCPVILGSATPSIDSYYLVETGKLTSLQLNQRAGHALLPKMH
LIDLKIVKKQHGISQPLIEQIKNTLARKEQVLIFLNRRGYAPVLVCESCGWQANCPHCDAHFTLHTQPYSYLHCHHCGTV
HRLPDHCPECQQKSLKTLGAGTAKVEEHLQELFPDYDVIRVDRDSTSRVGSWQKIYDRIHQNKPTILLGTQMLAKGHHFP
HVTLVAILDIDAGLLSVDIRAPERTAQLIVQVAGRAGRGEHKGHVYLQTLRPDHPLLTTLIEKDYRAVAKQTLAERKVAL
LPPYRYAVLIRAESKDRDYTLHFLNEAAEQLRQIAGDIVDIWGPIPAPMERKAGRYRAHMVILSADRARLHFYLRQWWSQ
LVHAPRQHQLRLSIDVDPQEFN

Nucleotide


Download         Length: 2229 bp        

>NTDB_id=211755 BVD86_RS13045 WP_101664170.1 2705211..2707439(+) (priA) [Acinetobacter pittii strain XJ88]
ATGACCATAACGCCAAAGCCTGATTCAGTTGTTTATCGTGTGCGTGTAGCCGTACCTGTACATCTGTACGACACTTTTGA
CTATACACTCACCCAAGCACAATATGAACGGGCTCATGTAGGCTCACGCGTCGCTATTTCATTTGGACGCCAAAATCTGA
TTGGCATCATTACTGAAAAAGTTGACCCAAGTGAATCGTTTACAGGCACCTTTCAGCTTAAAGCCATTTCTGACCTTTTA
GACGAACAGCCTATTTTAGATGAACAAGTTTTAAGTTTATTGACATGGTCAGCTCAATATTACCAATTTCCAATTGGCGA
GGTCATGCAAACCGCCCTACCCGCATTATTGCGTCAGGGTAAACCAATGGATGTTTTGTTCCATCTTTGGAAAATCACAC
CATGTGATAATGTTGAAGCACTTCTTAAACGCTCTGTTAAGCAACAAGACGCGTATCAAATTTTAAAGTTACACCCTGCC
GGAACTACAGAGAATATTCTTAATCTAAGTGGTGTAGAAACGGCTACGCTTAAAGCACTTCAAAAGAAAGGACTGGTTGA
CTGTACGCTTGAACCACACGACTTTAGCCCATCGCCTGTTCAATTGGCACAAATGCCGCTCACGCTAAATGAAGACCAAA
AGAAAGCAACTCAGCACGTCGTAAACGCACAGCATCAATACCAAGCATTTTTATTAGATGGTTTAACAGGAAGTGGTAAA
ACTGAAGTTTATCTGCACATCATGCACGAGGTTCTAAAGCAAGGTAAACAAGTACTGGTGTTAGTCCCAGAAATTGGTCT
AACCCCTCAAACGATTTCTCGTTTTAAGTCTCGTTTTAACTGTGATATTGCTCTATTGCACTCAGGCTTAAATGACTCTA
AACGCTTACAAGCATGGCAACAGGCCCAGACTGGCAAAGCATCTATTATTTTAGGAACCCGCTCAGCCATCTATACGCCA
CTACCACGTTTGGGCTTAATTATTTTAGATGAAGAGCATGACCTGTCTTATAAGCAACAAGAAGGCTTCCGCTACCATGC
ACGTGATGTCGCACTTTATCGAGGCCACTTACAAAACTGCCCTGTTATTTTAGGTTCAGCAACACCGAGCATCGATAGTT
ATTATTTGGTCGAAACTGGTAAATTAACTTCACTGCAACTTAACCAACGTGCAGGCCATGCGCTTTTACCTAAAATGCAT
TTGATTGACCTTAAAATTGTCAAAAAACAGCATGGAATTAGCCAGCCTTTAATCGAACAGATTAAAAATACCCTAGCTAG
AAAAGAACAGGTTTTAATCTTTTTAAACCGTCGTGGCTATGCACCTGTACTGGTCTGTGAAAGTTGTGGATGGCAAGCAA
ATTGTCCGCATTGTGATGCCCATTTTACTTTACATACTCAGCCTTATTCTTATTTACACTGCCACCACTGCGGCACTGTT
CATCGCTTGCCAGACCATTGCCCTGAATGCCAGCAAAAAAGCTTAAAAACCTTAGGAGCAGGGACAGCCAAGGTTGAAGA
GCACTTACAAGAACTATTTCCAGACTATGATGTGATTCGGGTTGATCGTGACAGCACCAGTCGTGTCGGTAGCTGGCAAA
AAATCTATGATCGTATTCATCAAAACAAACCAACAATTTTGCTGGGCACTCAAATGTTGGCTAAAGGCCATCATTTCCCA
CACGTGACTTTGGTTGCTATTTTAGATATTGATGCTGGGTTACTGAGTGTCGACATTCGTGCGCCAGAACGTACTGCGCA
GTTAATTGTACAAGTCGCTGGTCGTGCAGGTCGTGGTGAACACAAAGGCCATGTTTATTTACAGACCTTAAGACCAGATC
ACCCTTTACTAACCACGCTCATCGAAAAAGATTATCGGGCGGTTGCTAAACAGACTCTTGCGGAACGTAAAGTCGCATTG
CTGCCGCCTTACCGTTATGCAGTACTGATACGTGCAGAGTCCAAAGATCGCGACTACACCTTACATTTCTTAAATGAAGC
GGCGGAACAATTACGCCAAATTGCAGGTGACATTGTTGATATTTGGGGTCCGATTCCAGCCCCTATGGAGCGTAAAGCTG
GGCGCTACCGCGCCCACATGGTGATTTTATCTGCTGACCGTGCTCGCCTACACTTTTACTTAAGGCAATGGTGGTCACAA
TTGGTTCATGCACCACGGCAGCATCAACTTCGGCTATCAATTGATGTTGATCCGCAAGAATTTAATTAG

Domains

Predicted by InterproScan.

Type III restriction enzyme, res subunit (ResIII)

(208-370)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(643-738)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

98.518

100

0.985

Multiple sequence alignment