Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   BVD88_RS04495 Genome accession   NZ_CP018907
Coordinates   756542..757003 (-) Length   153 a.a.
NCBI ID   WP_002216872.1    Uniprot ID   A0A2J1SH93
Organism   Neisseria meningitidis strain M21273     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 751542..762003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVD88_RS04470 (BVD88_04705) surE 753062..753808 (+) 747 WP_002220609.1 5'/3'-nucleotidase SurE -
  BVD88_RS04475 (BVD88_04715) - 754064..755311 (+) 1248 WP_002227172.1 M23 family metallopeptidase -
  BVD88_RS04480 (BVD88_04725) - 755672..756154 (-) 483 WP_002216871.1 acyl-CoA thioesterase -
  BVD88_RS04490 (BVD88_04735) - 756307..756468 (-) 162 WP_002238113.1 hypothetical protein -
  BVD88_RS04495 (BVD88_04740) recX 756542..757003 (-) 462 WP_002216872.1 recombination regulator RecX Regulator
  BVD88_RS04500 (BVD88_04745) - 757076..757786 (-) 711 WP_002222258.1 phosphoglycolate phosphatase -
  BVD88_RS04510 (BVD88_04755) - 758193..759458 (+) 1266 WP_002229664.1 Glu/Leu/Phe/Val family dehydrogenase -
  BVD88_RS04515 (BVD88_04760) - 759516..760322 (-) 807 WP_002212946.1 DUF4198 domain-containing protein -
  BVD88_RS04520 (BVD88_04770) - 760667..760876 (+) 210 WP_002212949.1 tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17717.03 Da        Isoelectric Point: 10.0960

>NTDB_id=211657 BVD88_RS04495 WP_002216872.1 756542..757003(-) (recX) [Neisseria meningitidis strain M21273]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=211657 BVD88_RS04495 WP_002216872.1 756542..757003(-) (recX) [Neisseria meningitidis strain M21273]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2J1SH93

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

98.039

100

0.98

Multiple sequence alignment