Detailed information    

insolico Bioinformatically predicted

Overview


Name   abrB   Type   Regulator
Locus tag   BVB96_RS10330 Genome accession   NZ_CP018903
Coordinates   1882235..1882522 (+) Length   95 a.a.
NCBI ID   WP_000648331.1    Uniprot ID   A0A2A8KZX2
Organism   Bacillus anthracis strain Tyrol 4675     
Function   repression of comK; repression of rok (predicted from homology)   
Competence regulation

Genomic Context


Location: 1877235..1887522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVB96_RS10310 (BVB96_10310) - 1878411..1878608 (+) 198 WP_001048092.1 DUF4083 domain-containing protein -
  BVB96_RS10315 (BVB96_10315) - 1878640..1879101 (+) 462 WP_000024993.1 NUDIX hydrolase -
  BVB96_RS10320 (BVB96_10320) nadE 1879148..1879966 (-) 819 WP_000174879.1 ammonia-dependent NAD(+) synthetase -
  BVB96_RS10325 (BVB96_10325) - 1880238..1882118 (+) 1881 WP_001025965.1 FtsX-like permease family protein -
  BVB96_RS10330 (BVB96_10330) abrB 1882235..1882522 (+) 288 WP_000648331.1 AbrB/MazE/SpoVT family DNA-binding domain-containing protein Regulator
  BVB96_RS10335 (BVB96_10335) - 1882797..1883747 (+) 951 WP_001089035.1 serine protease -
  BVB96_RS10340 (BVB96_10340) - 1883788..1884096 (-) 309 WP_001259894.1 ArsR/SmtB family transcription factor -
  BVB96_RS10345 (BVB96_10345) - 1884204..1885139 (+) 936 WP_000877936.1 aldo/keto reductase -
  BVB96_RS10350 (BVB96_10350) - 1885342..1886518 (+) 1177 Protein_1870 MFS transporter -
  BVB96_RS10355 (BVB96_10355) - 1886706..1886930 (-) 225 WP_000162601.1 hypothetical protein -
  BVB96_RS10360 (BVB96_10360) - 1887015..1887362 (-) 348 WP_000426312.1 DUF4257 domain-containing protein -

Sequence


Protein


Download         Length: 95 a.a.        Molecular weight: 10645.40 Da        Isoelectric Point: 6.3179

>NTDB_id=211593 BVB96_RS10330 WP_000648331.1 1882235..1882522(+) (abrB) [Bacillus anthracis strain Tyrol 4675]
MKATGVIRKVDELGRIVIPKELRDVLGIQIKSPLEIFVEEDKVILQKYQPYNACQITGDVSNQNISLANGNITVSIDGAK
YLIKEIEKFLNKSEV

Nucleotide


Download         Length: 288 bp        

>NTDB_id=211593 BVB96_RS10330 WP_000648331.1 1882235..1882522(+) (abrB) [Bacillus anthracis strain Tyrol 4675]
ATGAAAGCAACAGGAGTTATTCGAAAAGTAGACGAATTAGGACGAATTGTTATTCCTAAAGAATTACGTGATGTATTGGG
AATACAAATCAAATCACCGCTTGAAATTTTCGTAGAAGAAGACAAAGTCATTTTACAAAAATATCAACCTTACAATGCTT
GTCAAATAACAGGTGATGTTTCAAATCAAAACATATCCTTAGCAAATGGAAACATTACTGTTAGTATAGATGGAGCGAAA
TATTTAATAAAAGAAATAGAGAAGTTTTTAAACAAGAGTGAGGTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  abrB Bacillus subtilis subsp. subtilis str. 168

54.444

94.737

0.516


Multiple sequence alignment