Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NGO_RS05150 Genome accession   NC_002946
Coordinates   1013748..1014209 (+) Length   153 a.a.
NCBI ID   WP_003688187.1    Uniprot ID   A0AA44U815
Organism   Neisseria gonorrhoeae FA 1090     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1008748..1019209
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NGO_RS05125 (NGO1047) - 1008781..1009995 (-) 1215 WP_003695054.1 pyridoxal phosphate-dependent aminotransferase -
  NGO_RS05130 (NGO1048) - 1010084..1010293 (-) 210 WP_003688192.1 tautomerase family protein -
  NGO_RS05135 (NGO1049) - 1010485..1011291 (+) 807 WP_003695051.1 DUF4198 domain-containing protein -
  NGO_RS05140 (NGO_05475) - 1011351..1012570 (-) 1220 Protein_1023 Glu/Leu/Phe/Val dehydrogenase -
  NGO_RS05145 (NGO1052) - 1012965..1013675 (+) 711 WP_003688188.1 phosphoglycolate phosphatase -
  NGO_RS05150 (NGO1053) recX 1013748..1014209 (+) 462 WP_003688187.1 recombination regulator RecX Regulator
  NGO_RS11100 (NGO_1054) - 1014283..1014444 (+) 162 WP_010358395.1 hypothetical protein -
  NGO_RS05155 (NGO1055) - 1014597..1015079 (+) 483 WP_003688183.1 acyl-CoA thioesterase -
  NGO_RS05160 (NGO1056) - 1015477..1016490 (-) 1014 WP_020996850.1 peptidoglycan DD-metalloendopeptidase family protein -
  NGO_RS05165 (NGO1058) surE 1016592..1017338 (-) 747 WP_010951167.1 5'/3'-nucleotidase SurE -
  NGO_RS05170 (NGO1059) - 1017355..1018911 (-) 1557 WP_003706387.1 TerC family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17745.13 Da        Isoelectric Point: 10.4361

>NTDB_id=21157 NGO_RS05150 WP_003688187.1 1013748..1014209(+) (recX) [Neisseria gonorrhoeae FA 1090]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEKTSRNLLPDRSSEKQAAIAVLRKKFKHPAANLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDSC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=21157 NGO_RS05150 WP_003688187.1 1013748..1014209(+) (recX) [Neisseria gonorrhoeae FA 1090]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTACGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAAAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAGCAAGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACATCCCGCCGCCAACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGTTTTGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACAGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

100

100

1

Multiple sequence alignment