Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   BUN12_RS02130 Genome accession   NZ_CP018902
Coordinates   375411..376067 (+) Length   218 a.a.
NCBI ID   WP_127721091.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain HK1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 370411..381067
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BUN12_RS02105 (BUN12_0410) oppF 370940..371857 (+) 918 WP_014470613.1 oligopeptide ABC transporter ATP-binding protein OppF -
  BUN12_RS02110 (BUN12_0411) - 371965..373152 (+) 1188 WP_013351829.1 putative glycoside hydrolase -
  BUN12_RS02115 (BUN12_0412) - 373270..373848 (+) 579 WP_013351830.1 GNAT family N-acetyltransferase -
  BUN12_RS02120 (BUN12_0413) spx 374026..374421 (+) 396 WP_003327578.1 transcriptional regulator Spx -
  BUN12_RS02125 (BUN12_0414) - 374479..375135 (-) 657 WP_013351831.1 TerC family protein -
  BUN12_RS02130 (BUN12_0415) mecA 375411..376067 (+) 657 WP_127721091.1 adaptor protein MecA Regulator
  BUN12_RS02135 (BUN12_0416) - 376219..377379 (+) 1161 WP_013351833.1 competence protein CoiA family protein -
  BUN12_RS02140 (BUN12_0417) pepF 377608..379437 (+) 1830 WP_013351834.1 oligoendopeptidase F Regulator
  BUN12_RS20855 (BUN12_0418) - 379473..379640 (-) 168 WP_003155026.1 hypothetical protein -
  BUN12_RS02145 (BUN12_0419) spxH 379925..380827 (-) 903 WP_013351835.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25972.73 Da        Isoelectric Point: 4.0828

>NTDB_id=211509 BUN12_RS02130 WP_127721091.1 375411..376067(+) (mecA) [Bacillus amyloliquefaciens strain HK1]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGSLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAENREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAQESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=211509 BUN12_RS02130 WP_127721091.1 375411..376067(+) (mecA) [Bacillus amyloliquefaciens strain HK1]
ATGGAAATAGAAAGAATTAATGAGCATACAGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTTCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTCT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAATCGGGAGGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ACGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATTAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
AGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGAAAATTGGTGATCGCTGATCATGCGTTATATACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895

Multiple sequence alignment