Detailed information NTG0211481

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: BU815_RS05360
• Genome accession: NZ_CP018900
• Coordinates: 1055690..1056634 (+)
• Length: 314 a.a.
• NCBI ID: WP_002791232.1
• Uniprot ID: A0A3Z9VJK7
• Organism: Campylobacter coli strain YH502
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1050690..1061634

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BU815_RS05335 (BU815_05365)	-	1050702..1051901 (-)	1200	WP_057980448.1	glycosyltransferase family 8 protein	-
BU815_RS09890	-	1052029..1052295 (+)	267	WP_195182675.1	hypothetical protein	-
BU815_RS05340 (BU815_05370)	-	1052331..1053332 (+)	1002	WP_195182676.1	CDP-glycerol glycerophosphotransferase family protein	-
BU815_RS05345 (BU815_05375)	-	1053329..1054378 (+)	1050	WP_057041879.1	asparagine synthase-related protein	-
BU815_RS05350 (BU815_05380)	-	1054381..1054797 (+)	417	WP_002796922.1	adenylyltransferase/cytidyltransferase family protein	-
BU815_RS05355 (BU815_05385)	-	1054816..1055631 (-)	816	WP_057991291.1	glycosyltransferase family 2 protein	-
BU815_RS05360 (BU815_05390)	waaF	1055690..1056634 (+)	945	WP_002791232.1	lipopolysaccharide heptosyltransferase II	Regulator
BU815_RS05365 (BU815_05395)	-	1056617..1058071 (-)	1455	WP_057041880.1	hypothetical protein	-
BU815_RS05370 (BU815_05400)	gmhA	1058083..1058643 (-)	561	WP_052779192.1	D-sedoheptulose 7-phosphate isomerase	-
BU815_RS05375 (BU815_05405)	rfaE1	1058640..1060025 (-)	1386	WP_057992412.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
BU815_RS05380 (BU815_05410)	rfaD	1060018..1060971 (-)	954	WP_002777234.1	ADP-glyceromanno-heptose 6-epimerase	-
BU815_RS05385 (BU815_05415)	-	1060968..1061531 (-)	564	WP_002777235.1	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36168.65 Da
• Isoelectric Point: 10.1355

>NTDB_id=211481 BU815_RS05360 WP_002791232.1 1055690..1056634(+) (waaF) [Campylobacter coli strain YH502]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELDKIDLSFT
FRSAFSSKIILHILKTRQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHSKDLKLPFKLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHIAAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKICPLKHHKCMKDLKPEMVLEKLKFDT

Nucleotide

• Length: 945 bp

>NTDB_id=211481 BU815_RS05360 WP_002791232.1 1055690..1056634(+) (waaF) [Campylobacter coli strain YH502]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCGCCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCTCGCTATAAACAAGCCCTATCTTTACGTAAAGAACTTGATAAAATCGATCTTAGCTTCACT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAGACAAAGATATTTTTTTGACAAAAATAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAAATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCTTAGGTTTAAACCCTGGAGCA
AGCTTTGGAAGCGCTAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTGA
AAAATCTTTGCAACAAAACTACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGCCCTATGCATATAGCTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTGAAATGGTTTTAGAAAAATTAAAATTTGATACTTAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

3D structure

• AlphaFold DB: A0A3Z9VJK7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.926	99.045	0.92