Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BU815_RS05035 | Genome accession | NZ_CP018900 |
| Coordinates | 990440..990745 (+) | Length | 101 a.a. |
| NCBI ID | WP_002777852.1 | Uniprot ID | A0A3Z9CUC7 |
| Organism | Campylobacter coli strain YH502 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 985440..995745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BU815_RS05010 (BU815_05040) | rpsR | 985799..986059 (+) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
| BU815_RS05015 (BU815_05045) | lon | 986115..988490 (-) | 2376 | WP_002783351.1 | endopeptidase La | - |
| BU815_RS05020 (BU815_05050) | - | 988506..989153 (-) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| BU815_RS05025 (BU815_05055) | fliW | 989317..989706 (+) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| BU815_RS05030 (BU815_05060) | proC | 989706..990443 (+) | 738 | WP_002780246.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BU815_RS05035 (BU815_05065) | ctsT | 990440..990745 (+) | 306 | WP_002777852.1 | hypothetical protein | Machinery gene |
| BU815_RS05040 (BU815_05070) | - | 990738..991406 (+) | 669 | WP_002797569.1 | hypothetical protein | - |
| BU815_RS05045 (BU815_05075) | - | 991403..991855 (+) | 453 | WP_002777117.1 | hypothetical protein | - |
| BU815_RS05050 (BU815_05080) | - | 991848..992477 (-) | 630 | WP_002777119.1 | uroporphyrinogen-III synthase | - |
| BU815_RS05055 (BU815_05085) | thiE | 992455..993087 (-) | 633 | WP_002777120.1 | thiamine phosphate synthase | - |
| BU815_RS05060 (BU815_05090) | thiD | 993077..993889 (-) | 813 | WP_075395213.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BU815_RS05065 (BU815_05095) | - | 993889..994572 (-) | 684 | WP_002824849.1 | 3-methyladenine DNA glycosylase | - |
| BU815_RS05070 (BU815_05100) | - | 994569..995330 (-) | 762 | WP_126655987.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12396.25 Da Isoelectric Point: 6.0617
>NTDB_id=211479 BU815_RS05035 WP_002777852.1 990440..990745(+) (ctsT) [Campylobacter coli strain YH502]
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILCIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=211479 BU815_RS05035 WP_002777852.1 990440..990745(+) (ctsT) [Campylobacter coli strain YH502]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTGTATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |