Detailed information NTG0021138

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: XF_RS10490
• Genome accession: NC_002488
• Coordinates: 2305586..2308483 (+)
• Length: 965 a.a.
• NCBI ID: WP_010894871.1
• Uniprot ID: Q9PAR9
• Organism: Xylella fastidiosa 9a5c
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2300586..2313483

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
XF_RS10465 (XF2420)	murJ	2301306..2302916 (-)	1611	WP_010894865.1	murein biosynthesis integral membrane protein MurJ	-
XF_RS10470 (XF2421)	rpsT	2303016..2303285 (+)	270	WP_010894866.1	30S ribosomal protein S20	-
XF_RS10475 (XF2422)	obgE	2303399..2304472 (-)	1074	WP_010894867.1	GTPase ObgE	-
XF_RS10480 (XF2423)	rpmA	2304644..2304901 (-)	258	WP_010894868.1	50S ribosomal protein L27	-
XF_RS10485 (XF2424)	rplU	2304925..2305245 (-)	321	WP_010894869.1	50S ribosomal protein L21	-
XF_RS10490 (XF2426)	uvrA	2305586..2308483 (+)	2898	WP_010894871.1	excinuclease ABC subunit UvrA	Machinery gene
XF_RS10495 (XF2427)	-	2308607..2309542 (-)	936	WP_042463404.1	hypothetical protein	-
XF_RS10500 (XF2428)	-	2310051..2311115 (-)	1065	WP_010894873.1	hypothetical protein	-
XF_RS10505 (XF2429)	guaA	2311167..2312735 (-)	1569	WP_010894874.1	glutamine-hydrolyzing GMP synthase	-

Sequence

Protein

• Length: 965 a.a.
• Molecular weight: 106896.75 Da
• Isoelectric Point: 6.5623

>NTDB_id=21138 XF_RS10490 WP_010894871.1 2305586..2308483(+) (uvrA) [Xylella fastidiosa 9a5c]
MTALIRIRGARTHNLKNLDLDLPRNTLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLSVMEKPDLDQIEGL
SPAISIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGQPRCPDHHYPLEAQTVSQMVDHVLTLDPEQRYMLLAPVVRERK
GEHTQVFEQLRAQGFVRVRVDGELYEIDVVPTLTLRQKHTIEAVIDRFRPREDIKQRLAESFETALKLGNGMASVQTLDT
TTTTPHLFSSKYSCPVCDYSLPELEPRLFSFNAPMGACPACNGLGVTEFFDPAKVVIHPDLSLSAGAVRGWDRRNAYYFQ
LIASLAKHYTFDIDASWESLPEEIRHTILFGSGDEQINFIYLTEAGGRTKRKHRFEGIVPNLERRYRETESAAVREELAK
YVSTRTCPECGGTRLNRAARNVFVADRTLPELTVLPINDALEFFKTLRLPGWRGEIAIKIVKEIGERLGFLVDVGLDYLT
LERKADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIVVEHDEDAIRQADHILD
IGPGAGVHGGEICAQGSLEQIMAAPRSLTGQYLSGRRRIEIPKQRHPPNATKMLHLRGACGNNLKGVNLDIPEGLFTCIT
GVSGSGKSTLINDTLFTLAANEINGASHPIAPYASVDGLELFDKVVDIDQSPIGRTPRSNPATYTGMFTPLRELFAQVPE
ARARGYSPGRFSFNVRGGRCEACEGDGLIKVEMHFLPDVYVPCDVCHGKRYNRETLEIRYKGYNINDVLEMTVEDALKLF
EAVPAIARKLETLVDVGLSYLKLGQSATTLSGGEAQRVKLSKELSRRDTGRTLYILDEPTTGLHFYDIEALLAVLHKLRD
AGNTVIVIEHNLDVIKTADWVIDLGPEGGGRGGEILVAGTPEAVAAHPHSHTGHFLAKLLPPKDVSNCGHRDPGEEVDIA
QTVHR

Nucleotide

• Length: 2898 bp

>NTDB_id=21138 XF_RS10490 WP_010894871.1 2305586..2308483(+) (uvrA) [Xylella fastidiosa 9a5c]
GTGACGGCCCTCATCCGTATCCGCGGCGCGCGGACACACAATCTTAAGAATCTGGATCTCGATCTACCGCGTAACACACT
GATCGTCATCACCGGCCTCTCCGGCTCTGGCAAATCATCGTTGGCATTTGACACGATCTACGCTGAAGGTCAGCGGCGCT
ATGTCGAATCACTGTCGGCCTACGCGCGGCAGTTTTTAAGCGTGATGGAAAAGCCGGATCTGGACCAGATTGAAGGGCTG
TCTCCGGCTATTTCAATTGAACAAAAGTCAACCTCGCATAATCCCCGCTCCACCGTCGGTACGATCACCGAGATCTACGA
TTATTTGCGTCTGCTGTATGCACGTGTCGGACAGCCGCGCTGCCCGGACCATCATTACCCGCTGGAAGCACAAACAGTGA
GCCAGATGGTGGATCACGTATTGACCTTGGATCCAGAGCAGCGCTACATGCTGTTGGCGCCTGTGGTACGTGAGCGCAAG
GGTGAACATACCCAAGTGTTCGAACAACTGCGTGCACAAGGCTTTGTGCGCGTGCGCGTGGATGGCGAACTGTATGAGAT
CGACGTGGTACCAACACTGACACTGCGTCAGAAGCATACGATTGAAGCGGTCATTGACCGTTTTCGCCCACGTGAGGACA
TCAAGCAACGTTTGGCGGAAAGCTTTGAAACTGCATTGAAGTTGGGCAACGGGATGGCTTCGGTCCAAACGCTGGACACA
ACAACAACCACACCACACCTGTTTTCCTCCAAGTACTCCTGTCCAGTATGCGATTATTCGCTACCGGAATTAGAGCCACG
GTTGTTCTCCTTCAACGCCCCGATGGGGGCGTGCCCCGCGTGCAACGGTCTGGGAGTCACCGAGTTTTTCGACCCGGCCA
AGGTCGTCATACATCCAGATCTTTCACTGTCAGCTGGTGCTGTGCGTGGTTGGGACCGCCGCAACGCTTACTATTTTCAA
TTGATCGCTTCGCTCGCCAAGCACTATACGTTCGACATTGACGCATCATGGGAATCGCTCCCTGAAGAGATCCGTCATAC
CATCCTGTTCGGCAGTGGCGATGAGCAGATCAACTTCATCTATTTGACGGAGGCTGGAGGGCGTACCAAGCGCAAACATC
GCTTTGAAGGCATTGTGCCGAACCTAGAGCGCCGCTACCGTGAGACAGAATCCGCTGCCGTACGTGAGGAACTGGCCAAG
TACGTCAGTACGCGGACCTGCCCGGAGTGCGGCGGCACACGTCTGAACCGCGCCGCACGCAATGTATTTGTTGCCGATCG
GACGCTCCCTGAGCTGACAGTGCTGCCAATTAATGACGCATTGGAATTCTTTAAAACGCTACGCCTGCCAGGCTGGCGTG
GTGAGATCGCAATTAAAATTGTCAAAGAAATCGGGGAGCGTCTCGGCTTCCTGGTCGATGTTGGTCTGGACTACCTAACA
TTGGAGCGTAAGGCCGACACACTCTCTGGTGGTGAAGCACAACGTATCCGCCTAGCGAGTCAGATCGGTGCTGGCCTCGT
GGGAGTGATGTATGTGCTGGACGAACCCTCCATCGGATTGCACCAGCGTGATAACGAACGCCTGCTCGGTACGCTGACTC
GGTTACGCGACCTTGGTAATACGGTGATTGTCGTTGAACACGACGAGGACGCCATCCGCCAAGCCGACCATATCCTCGAC
ATTGGTCCCGGTGCCGGTGTGCATGGCGGTGAGATCTGTGCTCAGGGGTCGTTGGAACAGATTATGGCCGCGCCGCGCTC
CTTGACTGGCCAATACTTATCCGGTCGACGCCGGATTGAAATCCCCAAACAGCGCCACCCCCCCAACGCCACGAAGATGC
TGCACCTGCGCGGCGCCTGCGGTAATAACCTTAAAGGCGTTAATCTTGACATCCCTGAGGGGCTGTTTACTTGCATTACT
GGGGTGTCCGGCTCCGGTAAATCGACGCTCATCAACGACACGTTGTTTACGTTAGCCGCAAACGAGATCAATGGTGCCTC
TCATCCAATTGCGCCGTATGCGTCAGTCGATGGTCTAGAGCTGTTCGACAAAGTGGTAGACATTGATCAATCACCGATCG
GACGCACGCCACGCTCCAACCCAGCAACCTACACCGGCATGTTCACTCCGTTACGCGAGCTTTTTGCGCAGGTTCCGGAG
GCGCGCGCGCGCGGTTATTCTCCAGGGCGTTTCAGCTTCAACGTGCGCGGCGGGCGCTGTGAAGCGTGTGAGGGCGACGG
GCTGATTAAGGTTGAAATGCACTTTTTACCCGACGTCTACGTGCCATGCGATGTATGTCATGGCAAACGTTACAACCGTG
AGACGCTGGAAATACGATACAAGGGATATAACATCAACGACGTGCTGGAGATGACCGTTGAAGATGCCTTAAAACTGTTT
GAAGCAGTACCAGCAATTGCACGCAAGCTGGAAACTTTGGTAGATGTAGGCTTGAGCTACCTCAAACTCGGCCAGAGTGC
GACGACGCTATCAGGCGGTGAGGCGCAGCGTGTCAAATTGTCCAAAGAGCTGTCACGACGCGACACCGGACGCACGCTGT
ATATCCTTGACGAACCAACCACTGGGCTGCATTTTTACGACATTGAAGCGCTGCTAGCAGTACTGCACAAACTGCGCGAT
GCAGGGAATACGGTCATCGTGATTGAGCATAATTTAGATGTGATCAAAACGGCGGATTGGGTCATTGATCTCGGCCCAGA
GGGAGGCGGACGCGGTGGTGAAATCCTGGTGGCCGGCACTCCTGAAGCGGTGGCTGCGCATCCTCACTCGCATACTGGCC
ACTTCTTAGCCAAGCTGTTACCTCCTAAGGATGTATCCAACTGCGGTCATCGGGACCCCGGAGAAGAGGTTGACATCGCA
CAAACGGTACACCGTTAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (624-860)

• UvrA interaction domain (UvrA_inter) (131-238)

• UvrA DNA-binding domain (UvrA_DNA-bind) (291-400)

3D structure

• AlphaFold DB: Q9PAR9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	56.064	97.409	0.546
uvrA	Streptococcus pneumoniae TIGR4	56.064	97.409	0.546
uvrA	Streptococcus pneumoniae D39	56.064	97.409	0.546