Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BUW91_RS15815 Genome accession   NZ_CP018874
Coordinates   3115149..3116099 (-) Length   316 a.a.
NCBI ID   WP_078081969.1    Uniprot ID   -
Organism   Priestia megaterium strain JX285     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3110149..3121099
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BUW91_RS29325 - 3110892..3111032 (-) 141 WP_170960213.1 hypothetical protein -
  BUW91_RS15795 (BUW91_15795) - 3111288..3112142 (-) 855 WP_013057886.1 manganese catalase family protein -
  BUW91_RS15800 (BUW91_15800) - 3112477..3113433 (-) 957 WP_029322847.1 siderophore ABC transporter substrate-binding protein -
  BUW91_RS15805 (BUW91_15805) - 3113457..3114215 (-) 759 WP_013057889.1 ABC transporter ATP-binding protein -
  BUW91_RS15810 (BUW91_15810) - 3114209..3115156 (-) 948 WP_029322849.1 iron chelate uptake ABC transporter family permease subunit -
  BUW91_RS15815 (BUW91_15815) ceuB 3115149..3116099 (-) 951 WP_078081969.1 ABC transporter permease Machinery gene
  BUW91_RS15820 (BUW91_15820) - 3116418..3117224 (-) 807 WP_013057892.1 cell wall hydrolase -
  BUW91_RS15825 (BUW91_15825) - 3117587..3117841 (+) 255 WP_013057893.1 hypothetical protein -
  BUW91_RS29330 - 3117923..3118087 (-) 165 WP_013057894.1 hypothetical protein -
  BUW91_RS15830 (BUW91_15830) - 3118405..3118749 (-) 345 WP_013057895.1 hypothetical protein -
  BUW91_RS15835 (BUW91_15835) - 3118792..3119823 (-) 1032 WP_013057896.1 zinc-binding dehydrogenase -
  BUW91_RS15840 (BUW91_15840) - 3119829..3120875 (-) 1047 WP_029322854.1 galactitol-1-phosphate 5-dehydrogenase -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35007.30 Da        Isoelectric Point: 9.9188

>NTDB_id=211217 BUW91_RS15815 WP_078081969.1 3115149..3116099(-) (ceuB) [Priestia megaterium strain JX285]
MKFYQLILVFAVLSILSLFVGVQDLSAMDLFHLTKEESQTLFFSRFPRLLSIIMAGMSLSICGLIMQQITRNKFVSPTTA
GAMDWARLGVLISLLVFASASPLLKMSIAFIFSLAGNLLFMRILDRIKFNDTIYIPLVGLMLGSIVSSLATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYLYADKFTVAGMGESFSINLGVKYKQIVNIGLVIVSLITSITILTVGM
LPFLGLIIPNIVSIYRGDHLRKSLPHTALLGAVFVLACDILGRVIIFPYEISIGLMVGVIGSAIFLFMLIRRGRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=211217 BUW91_RS15815 WP_078081969.1 3115149..3116099(-) (ceuB) [Priestia megaterium strain JX285]
TTGAAGTTTTATCAGTTAATTCTTGTGTTTGCTGTACTATCGATTTTGTCTCTTTTTGTAGGAGTACAAGATCTGTCAGC
GATGGATCTGTTTCATTTAACAAAAGAAGAAAGCCAAACGCTGTTTTTCAGTCGTTTTCCTAGGCTTTTGAGTATTATTA
TGGCGGGAATGAGCCTTAGTATTTGTGGATTAATTATGCAGCAAATTACGCGAAATAAGTTTGTATCTCCAACAACGGCA
GGAGCGATGGACTGGGCAAGGCTTGGTGTGTTGATTTCTCTACTAGTATTTGCTTCAGCAAGTCCTCTATTAAAAATGAG
CATTGCTTTCATTTTCTCACTGGCGGGCAATCTATTGTTTATGAGAATACTAGACAGAATTAAATTTAACGATACGATTT
ATATTCCACTAGTCGGTTTAATGCTCGGTAGTATCGTAAGTTCCTTAGCTACCTTCATTGCCTACAAATACGATTTGATT
CAAAACCTTTCTTCATGGCTGCAAGGCGACTTTTCGCTAGTAGTCAAGGGGAGATATGAACTTTTATACCTTAGTATACC
GCTCTTAATAATTGCTTATCTTTACGCAGATAAGTTCACGGTTGCTGGTATGGGAGAAAGCTTTTCAATCAATTTAGGCG
TGAAATACAAACAAATCGTAAACATTGGATTAGTCATTGTTTCGCTTATTACTTCGATTACGATTTTGACCGTTGGCATG
CTGCCTTTCTTAGGATTAATCATCCCAAATATCGTATCGATTTACCGTGGAGATCATTTGCGCAAAAGCCTGCCTCATAC
AGCGCTGCTTGGAGCTGTGTTCGTACTTGCGTGCGATATTTTAGGCAGAGTCATTATTTTCCCTTATGAAATCTCTATTG
GGTTAATGGTAGGTGTAATAGGAAGTGCGATCTTTCTTTTTATGCTGATAAGGAGAGGTCGTTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.987

95.57

0.497

Multiple sequence alignment