Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   AHTJS_RS14125 Genome accession   NZ_CP018871
Coordinates   2866265..2867149 (-) Length   294 a.a.
NCBI ID   WP_075316232.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain TJS01     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2861265..2872149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AHTJS_RS14105 (AHTJS_14090) - 2861853..2862932 (+) 1080 WP_017394568.1 PhoH family protein -
  AHTJS_RS14110 (AHTJS_14095) ybeY 2862951..2863436 (+) 486 WP_075316230.1 rRNA maturation RNase YbeY -
  AHTJS_RS14115 (AHTJS_14100) - 2863448..2863747 (+) 300 WP_005083612.1 antibiotic biosynthesis monooxygenase family protein -
  AHTJS_RS14120 (AHTJS_14105) - 2863818..2865995 (-) 2178 WP_075316231.1 TonB-dependent siderophore receptor -
  AHTJS_RS14125 (AHTJS_14110) tonB2 2866265..2867149 (-) 885 WP_075316232.1 energy transducer TonB Machinery gene
  AHTJS_RS14130 (AHTJS_14115) - 2867384..2868067 (+) 684 WP_075316233.1 hypothetical protein -
  AHTJS_RS14135 (AHTJS_14120) - 2868262..2868978 (+) 717 WP_004637832.1 DUF3108 domain-containing protein -
  AHTJS_RS14140 (AHTJS_14125) - 2869123..2869698 (+) 576 WP_075316234.1 xanthine phosphoribosyltransferase -
  AHTJS_RS14145 (AHTJS_14130) - 2869744..2870517 (-) 774 WP_004637830.1 YwqG family protein -
  AHTJS_RS14150 (AHTJS_14135) thyA 2870689..2871531 (+) 843 WP_005083621.1 thymidylate synthase -
  AHTJS_RS14155 (AHTJS_14140) - 2871552..2872061 (+) 510 WP_004637828.1 dihydrofolate reductase -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33558.11 Da        Isoelectric Point: 6.8580

>NTDB_id=211175 AHTJS_RS14125 WP_075316232.1 2866265..2867149(-) (tonB2) [Acinetobacter haemolyticus strain TJS01]
MWNKINFRTQMTSFWWQDPIFVGAVVIAIMVHGLVLITQFSMPAPTDTSTKEIAVSVRPSQDKVEHADFLAQTDQQGSGE
FHQAHRMSSDMPTPMQSDATTGEHELESLETIQQKRELLFEEKVLMTVLSWQKQAEQNERKKALEELQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDAAKQQRLAGEVRLMVILNAQGGIRAIRL
IESSGHPILDEAARASVRRGAPFGAFDSNMKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=211175 AHTJS_RS14125 WP_075316232.1 2866265..2867149(-) (tonB2) [Acinetobacter haemolyticus strain TJS01]
ATGTGGAATAAAATAAATTTTCGTACTCAAATGACTTCCTTCTGGTGGCAAGATCCGATTTTTGTTGGAGCAGTTGTTAT
TGCAATCATGGTACATGGACTCGTACTGATAACACAATTTTCAATGCCTGCACCTACTGATACATCAACCAAAGAAATCG
CCGTGTCTGTACGTCCAAGTCAAGATAAGGTCGAGCATGCAGATTTTTTAGCGCAAACTGATCAACAAGGATCAGGTGAA
TTTCATCAAGCACATCGTATGTCTAGTGATATGCCTACGCCAATGCAAAGTGATGCAACCACAGGAGAGCATGAGCTAGA
AAGTCTCGAAACCATACAACAGAAGCGTGAACTTCTCTTTGAGGAAAAAGTGTTAATGACAGTGTTAAGTTGGCAAAAGC
AAGCTGAACAGAATGAGCGTAAGAAAGCATTAGAAGAATTACAAAGTCAATTTCAAGCCAAAGCTGCGATGGTGGCAAGT
TTAGAAGCGCAATATTTACAACGACAACAAAATTTTAGCCGTAAGCAACGTATTAAAACGGTTGATGGGATACAAGCGAA
ACAAGATGCATCGGCAGCGTATCTCGATAAATTCCGACAAAAAGTTGAGTTGTATGGCAATCGTTATTATCCCGATGCGG
CAAAACAGCAACGCTTAGCGGGTGAAGTCCGTTTAATGGTGATTTTAAATGCGCAAGGCGGTATCCGAGCCATTCGTTTA
ATTGAGAGCTCAGGACATCCGATTTTGGATGAAGCAGCTCGTGCTTCTGTTCGCCGTGGTGCACCATTTGGAGCTTTTGA
CAGCAATATGAAGGATATTTCTGAGCTACGAATTATCCGAACATGGCGTTTTGATCCAGTGGATGCTGAATTTGAAGTGC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

75.17

100

0.752

Multiple sequence alignment