Detailed information NTG0021117

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LPG_RS13480
• Genome accession: NC_002942
• Coordinates: 3016947..3018014 (-)
• Length: 355 a.a.
• NCBI ID: WP_015443981.1
• Uniprot ID: -
• Organism: Legionella pneumophila subsp. pneumophila str. Philadelphia
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3011947..3023014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LPG_RS13455 (lpg2665)	-	3012238..3012954 (-)	717	WP_010948365.1	dienelactone hydrolase family protein	-
LPG_RS13460 (lpg2666)	-	3013236..3014102 (+)	867	WP_015443982.1	alpha/beta hydrolase	-
LPG_RS13465 (lpg2667)	rpoH	3014236..3015090 (-)	855	WP_013101924.1	RNA polymerase sigma factor RpoH	-
LPG_RS13470 (lpg2668)	ftsX	3015387..3016316 (-)	930	WP_010948368.1	permease-like cell division protein FtsX	-
LPG_RS13475 (lpg2669)	ftsE	3016310..3016960 (-)	651	WP_011216539.1	cell division ATP-binding protein FtsE	-
LPG_RS13480 (lpg2670)	pilA	3016947..3018014 (-)	1068	WP_015443981.1	signal recognition particle-docking protein FtsY	Machinery gene
LPG_RS13485 (lpg2671)	-	3018077..3019402 (+)	1326	WP_010948371.1	M16 family metallopeptidase	-
LPG_RS13490 (lpg2672)	-	3019399..3020703 (+)	1305	WP_010948372.1	M16 family metallopeptidase	-
LPG_RS13495 (lpg2673)	rsmD	3020700..3021245 (+)	546	WP_010948373.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LPG_RS13500 (lpg2674)	dotD	3021320..3021811 (+)	492	WP_010948374.1	type IVB secretion system lipoprotein DotD	-
LPG_RS13505 (lpg2675)	dotC	3021792..3022703 (+)	912	WP_010948375.1	type IVB secretion system protein DotC	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38999.64 Da
• Isoelectric Point: 6.1205

>NTDB_id=21117 LPG_RS13480 WP_015443981.1 3016947..3018014(-) (pilA) [Legionella pneumophila subsp. pneumophila str. Philadelphia]
MIKWFKRNQNSEPNLDAEEQQDHAKSSMESRLEEPQELTVKEPSPKESIFARFRKGLSKTRHQLGEGISRLLLGKKEISQ
ELLEELETLLISADLGLDTTQDVLKQLNEGLARKQLSNGEAVYLTLKTNLQTILSQEEKPLSIETEDGSPFVILMVGVNG
AGKTTTIGKLAKQFQKQGKKVMLAAGDTFRAAAVEQLHVWGERNGIPVIAQHTGADSASVIFDALQAAKARKIDVLIADT
AGRLHTQSNLMEELKKVKRVMQKLDPKAPHETMLVLDASIGQNALAQAKQFHEAVQLTGITMTKLDGTAKGGILFAIAND
LGIPFRYLGVGEGIEDLRPFDAAQFVSAIFDDDHI

Nucleotide

• Length: 1068 bp

>NTDB_id=21117 LPG_RS13480 WP_015443981.1 3016947..3018014(-) (pilA) [Legionella pneumophila subsp. pneumophila str. Philadelphia]
ATGATTAAATGGTTTAAACGAAATCAAAATTCCGAACCAAATTTGGATGCCGAAGAGCAACAAGATCATGCCAAAAGCAG
CATGGAATCCAGGCTTGAAGAACCCCAGGAACTGACTGTCAAAGAGCCTTCGCCCAAAGAAAGTATTTTTGCCCGGTTTA
GGAAAGGCCTTAGCAAAACCCGTCATCAATTGGGGGAAGGCATAAGTCGGCTGCTGTTAGGTAAAAAAGAAATCAGCCAG
GAGTTACTCGAAGAGCTAGAGACCTTATTAATTAGTGCTGATTTAGGTTTGGACACCACTCAAGACGTATTGAAACAGCT
AAATGAAGGCTTGGCACGAAAGCAACTGTCTAATGGTGAAGCAGTTTATCTGACTCTAAAGACAAATTTGCAAACTATTT
TGAGCCAGGAAGAGAAACCGCTTTCCATAGAAACTGAAGACGGCTCTCCCTTTGTCATATTAATGGTTGGTGTCAATGGA
GCCGGTAAAACAACCACGATTGGTAAACTAGCCAAACAATTCCAAAAGCAGGGAAAAAAAGTCATGTTAGCTGCGGGCGA
TACGTTTCGGGCGGCTGCGGTGGAACAATTGCATGTATGGGGCGAAAGAAATGGCATACCTGTTATTGCCCAGCATACCG
GCGCTGACAGTGCCTCAGTAATATTTGATGCTCTTCAGGCTGCCAAAGCGAGAAAAATAGATGTTTTAATCGCTGATACA
GCCGGGCGTTTGCATACTCAAAGCAATTTAATGGAAGAGTTGAAAAAAGTGAAAAGAGTCATGCAGAAACTCGATCCCAA
GGCACCTCATGAAACCATGTTGGTATTGGATGCGAGTATTGGGCAGAACGCCTTGGCTCAGGCAAAGCAGTTTCATGAAG
CAGTACAATTAACTGGAATTACTATGACCAAGCTTGATGGGACAGCCAAAGGCGGGATATTATTTGCTATAGCGAATGAT
TTGGGGATACCTTTTCGTTATTTAGGGGTAGGGGAGGGCATTGAAGATTTGAGGCCCTTTGACGCAGCGCAATTTGTTAG
TGCGATATTCGATGATGATCACATTTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (64-129)

• SRP54-type protein, GTPase domain (SRP54) (150-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.353	95.775	0.501