Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BUQ73_RS24220 Genome accession   NZ_CP018846
Coordinates   5338497..5338898 (-) Length   133 a.a.
NCBI ID   WP_060509720.1    Uniprot ID   A0A315TAV4
Organism   Pseudomonas putida strain AA7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5333497..5343898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BUQ73_RS24205 - 5335462..5337486 (-) 2025 WP_237772800.1 methyl-accepting chemotaxis protein -
  BUQ73_RS24210 - 5337534..5338088 (-) 555 WP_008094837.1 chemotaxis protein CheW -
  BUQ73_RS24215 pilH 5338085..5338450 (-) 366 WP_060509717.1 twitching motility response regulator PilH -
  BUQ73_RS24220 pilG 5338497..5338898 (-) 402 WP_060509720.1 response regulator Regulator
  BUQ73_RS24225 gshB 5339095..5340048 (+) 954 WP_079229985.1 glutathione synthase -
  BUQ73_RS24230 - 5340140..5341045 (+) 906 WP_079229986.1 energy transducer TonB -
  BUQ73_RS24235 - 5341154..5341723 (+) 570 WP_079229987.1 YqgE/AlgH family protein -
  BUQ73_RS24240 ruvX 5341723..5342148 (+) 426 WP_023378332.1 Holliday junction resolvase RuvX -
  BUQ73_RS24245 pyrR 5342207..5342725 (+) 519 WP_079229988.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  BUQ73_RS24250 - 5342739..5343743 (+) 1005 WP_027920654.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14630.95 Da        Isoelectric Point: 5.6468

>NTDB_id=210982 BUQ73_RS24220 WP_060509720.1 5338497..5338898(-) (pilG) [Pseudomonas putida strain AA7]
MEQPLKVMVIDDSRTIRRTAQMLLGEAGCEVITASDGFDALAKIIDHQPQIIFVDVLMPRLDGYQTCAVIKHNSAFKDIP
VILLSSRDGLFDKARGRVVGSDQFLTKPFSKEELLDAIRAHVPGFAAPEQPAP

Nucleotide


Download         Length: 402 bp        

>NTDB_id=210982 BUQ73_RS24220 WP_060509720.1 5338497..5338898(-) (pilG) [Pseudomonas putida strain AA7]
ATGGAACAGCCCCTGAAGGTGATGGTGATCGACGATTCCCGCACGATCCGCCGCACCGCGCAGATGTTGCTCGGCGAAGC
GGGCTGCGAGGTGATCACCGCCAGTGACGGCTTCGATGCCCTGGCCAAGATCATCGACCACCAGCCACAGATCATCTTCG
TCGACGTGCTGATGCCCCGTCTGGACGGTTATCAGACCTGTGCGGTGATCAAGCACAACAGTGCCTTCAAGGACATCCCG
GTGATTCTCCTGTCGTCTCGCGATGGCCTGTTCGACAAGGCTCGCGGCCGGGTGGTCGGTTCCGACCAGTTCCTGACCAA
ACCATTCAGCAAGGAAGAACTGCTCGACGCGATCAGGGCCCATGTACCTGGTTTCGCCGCGCCCGAACAACCCGCACCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(7-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A315TAV4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.672

91.729

0.639

Multiple sequence alignment