Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BUM80_RS08790 Genome accession   NZ_CP018838
Coordinates   1615860..1616618 (+) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae strain 11A     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1610860..1621618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BUM80_RS08760 (BUM80_08975) comE 1611457..1612209 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  BUM80_RS08765 (BUM80_08980) comD/comD1 1612206..1613531 (-) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  BUM80_RS08770 (BUM80_08985) comC/comC1 1613552..1613677 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  BUM80_RS08780 (BUM80_08995) rlmH 1613959..1614438 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BUM80_RS08785 (BUM80_09000) htrA 1614621..1615802 (+) 1182 WP_000681598.1 S1C family serine protease Regulator
  BUM80_RS08790 (BUM80_09005) spo0J 1615860..1616618 (+) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  BUM80_RS08795 (BUM80_09010) dnaA 1616831..1618192 (+) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  BUM80_RS08800 (BUM80_09015) dnaN 1618351..1619487 (+) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  BUM80_RS08805 (BUM80_09020) - 1619552..1619746 (+) 195 WP_000285193.1 DUF951 domain-containing protein -
  BUM80_RS11570 - 1620175..1620333 (-) 159 WP_000568693.1 hypothetical protein -
  BUM80_RS08810 (BUM80_09025) - 1620387..1620779 (-) 393 WP_000417889.1 hypothetical protein -
  BUM80_RS08815 (BUM80_09030) - 1620935..1621345 (-) 411 WP_000187312.1 DUF1492 domain-containing protein -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=210862 BUM80_RS08790 WP_000410378.1 1615860..1616618(+) (spo0J) [Streptococcus pneumoniae strain 11A]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=210862 BUM80_RS08790 WP_000410378.1 1615860..1616618(+) (spo0J) [Streptococcus pneumoniae strain 11A]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment