Detailed information
Bioinformatically predicted
Overview
| Name | fimT | Type | Machinery gene |
| Locus tag | LPG_RS03130 | Genome accession | NC_002942 |
| Coordinates | 668593..669300 (-) | Length | 235 a.a. |
| NCBI ID | WP_010946369.1 | Uniprot ID | Q5ZXU9 |
| Organism | Legionella pneumophila subsp. pneumophila str. Philadelphia | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 663593..674300
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPG_RS03115 (lpg0629) | - | 666468..666980 (-) | 513 | WP_010946366.1 | pilus assembly PilX family protein | - |
| LPG_RS03120 (lpg0630) | - | 666977..668044 (-) | 1068 | WP_010946367.1 | PilW family protein | - |
| LPG_RS03125 (lpg0631) | pilV | 668041..668580 (-) | 540 | WP_010946368.1 | type IV pilus modification protein PilV | - |
| LPG_RS03130 (lpg0632) | fimT | 668593..669300 (-) | 708 | WP_010946369.1 | GspH/FimT family pseudopilin | Machinery gene |
| LPG_RS03135 (lpg0633) | - | 669522..670382 (-) | 861 | WP_011213225.1 | polysaccharide deacetylase family protein | - |
| LPG_RS03140 (lpg0634) | - | 670559..671908 (-) | 1350 | WP_010946371.1 | lpg0634 family Dot/Icm T4SS effector | - |
| LPG_RS03145 (lpg0635) | - | 672196..673677 (+) | 1482 | WP_010946372.1 | phospholipid carrier-dependent glycosyltransferase | - |
Sequence
Protein
Download Length: 235 a.a. Molecular weight: 24868.47 Da Isoelectric Point: 7.0384
>NTDB_id=21086 LPG_RS03130 WP_010946369.1 668593..669300(-) (fimT) [Legionella pneumophila subsp. pneumophila str. Philadelphia]
MNKVITESQKFTLRNIANMLFCVESSVLPAQSNIAQKIQTQGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
MNKVITESQKFTLRNIANMLFCVESSVLPAQSNIAQKIQTQGIMYNDLCKDSFDTEAPLNSNPLSIAGFTLVELLVTLSV
FAIILTLIVPSLRTMILNSRLTSNIDSLVSSLNYARGVALDRAVNVAVCPLGSPGSTACGANWSSGWIVVTQPVAGAPTL
LKSHQTSVNDPVITSNVSSVVFDPHGLSTTQSNFTMCDNRGNAFARSAMVLATGFVQSGTTPGQAVWNNGALNCP
Nucleotide
Download Length: 708 bp
>NTDB_id=21086 LPG_RS03130 WP_010946369.1 668593..669300(-) (fimT) [Legionella pneumophila subsp. pneumophila str. Philadelphia]
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCTGCGCAACATAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
GTTGCCCGCACAATCTAATATAGCACAAAAGATACAAACACAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGCCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTTTGAACTGCCCTTAA
TTGAACAAAGTGATAACGGAATCACAAAAATTCACTCTGCGCAACATAGCTAATATGTTATTTTGCGTTGAGAGTAGTGT
GTTGCCCGCACAATCTAATATAGCACAAAAGATACAAACACAAGGCATAATGTACAATGATCTTTGTAAAGACAGCTTCG
ATACTGAGGCCCCTCTTAACAGCAACCCTCTTTCCATAGCCGGATTCACACTGGTTGAATTATTAGTAACCCTATCTGTT
TTTGCCATCATCTTAACTCTAATCGTCCCTTCATTAAGAACTATGATTTTGAATAGCCGTTTGACTTCAAACATTGACTC
ACTGGTAAGCTCATTAAACTATGCGCGTGGAGTGGCACTTGATCGGGCAGTCAATGTGGCAGTATGCCCATTAGGTTCAC
CAGGTTCAACGGCCTGTGGAGCCAACTGGAGCTCAGGATGGATAGTAGTGACCCAACCAGTAGCAGGAGCACCAACGCTT
TTAAAATCGCACCAGACTTCAGTGAATGATCCTGTTATCACTTCGAACGTATCCAGTGTTGTTTTTGACCCACATGGGTT
ATCAACAACCCAAAGTAACTTCACTATGTGTGATAACAGAGGCAATGCGTTTGCCCGCTCGGCAATGGTTTTGGCCACTG
GATTTGTCCAATCCGGAACAACACCCGGCCAAGCAGTCTGGAATAATGGAGCTTTGAACTGCCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimT | Legionella pneumophila strain Lp02 |
100 |
100 |
1 |