Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   BTR42_RS12445 Genome accession   NZ_CP018822
Coordinates   2491921..2492697 (+) Length   258 a.a.
NCBI ID   WP_074658518.1    Uniprot ID   A0A1I7IN68
Organism   Streptococcus gallolyticus subsp. gallolyticus DSM 16831     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2486921..2497697
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BTR42_RS12435 (BTR42_12185) rlmH 2489896..2490375 (-) 480 WP_009855220.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  BTR42_RS12440 (BTR42_12190) htrA 2490586..2491851 (+) 1266 WP_077497985.1 S1C family serine protease Regulator
  BTR42_RS12445 (BTR42_12195) spo0J 2491921..2492697 (+) 777 WP_074658518.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 258 a.a.        Molecular weight: 29622.44 Da        Isoelectric Point: 9.8939

>NTDB_id=210666 BTR42_RS12445 WP_074658518.1 2491921..2492697(+) (spo0J) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MPETLILIKIENISPNPYQPRLEFKQEELEELARSIKTNGLIQPIIVRESTVFGYELIAGERRLRASKIAGLTEIPAIIK
NISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTHEELAQFMGKSRPYITNCLRLLNLPKSLSDAVEKGELSQG
HARVLLTLKSAEEQEKWYQKILANDISVRKLEHLLKPAKKKKNRPKKKDIFIRNQEEELTKQLGLPVKIIVSKTGTKGEV
SLHFQSEEDLNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=210666 BTR42_RS12445 WP_074658518.1 2491921..2492697(+) (spo0J) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGCCTGAAACACTCATATTAATCAAAATTGAAAATATCTCACCTAATCCCTACCAACCCCGTTTAGAATTTAAACAAGA
AGAGCTAGAAGAACTAGCACGTTCGATTAAAACTAATGGGCTTATTCAGCCGATTATCGTCCGAGAATCAACTGTCTTTG
GTTATGAGCTTATTGCTGGTGAACGACGTCTAAGAGCCTCAAAAATAGCAGGTTTAACCGAAATTCCTGCTATCATAAAA
AATATCTCCAATCAGGAGAGTATGCAGCTAGCTATCGTTGAAAATTTGCAACGTTCTGATTTGAATCCAATCGAAGAAGC
AAAAGCTTACCAGCAACTTCTGGAAAAAAATCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCTCGCCCCT
ACATTACCAATTGCCTCAGATTACTTAACCTTCCTAAAAGTCTCTCTGATGCCGTTGAAAAAGGTGAGCTGTCTCAAGGA
CACGCGCGTGTTCTTTTAACCCTTAAAAGTGCTGAAGAACAAGAGAAGTGGTATCAAAAAATTCTAGCAAATGATATTAG
CGTTAGAAAACTTGAACATTTACTAAAACCTGCTAAAAAGAAAAAAAATCGTCCCAAAAAGAAAGATATTTTCATTCGAA
ATCAAGAAGAAGAATTGACCAAACAGTTAGGACTTCCTGTTAAAATTATCGTCTCTAAAACTGGCACAAAAGGAGAGGTG
AGTTTACATTTTCAATCTGAAGAAGACTTAAACAGAATTATCAACAAGCTAAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1I7IN68

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.755

99.612

0.585


Multiple sequence alignment