Detailed information NTG0210616

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: BTR42_RS02200
• Genome accession: NZ_CP018822
• Coordinates: 392138..393067 (+)
• Length: 309 a.a.
• NCBI ID: WP_077496208.1
• Uniprot ID: -
• Organism: Streptococcus gallolyticus subsp. gallolyticus DSM 16831
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 387138..398067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTR42_RS02180 (BTR42_01900)	-	387358..389013 (+)	1656	WP_077496206.1	peptide ABC transporter substrate-binding protein	-
BTR42_RS02185 (BTR42_01905)	-	389124..390038 (+)	915	WP_009853404.1	ABC transporter permease	-
BTR42_RS02190 (BTR42_01910)	-	390049..391080 (+)	1032	WP_009853405.1	ABC transporter permease	-
BTR42_RS02195 (BTR42_01915)	oppD	391092..392138 (+)	1047	WP_009853406.1	ABC transporter ATP-binding protein	Regulator
BTR42_RS02200 (BTR42_01920)	amiF	392138..393067 (+)	930	WP_077496208.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 35023.76 Da
• Isoelectric Point: 5.4462

>NTDB_id=210616 BTR42_RS02200 WP_077496208.1 392138..393067(+) (amiF) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
MTENRKKLVELKNVSLTFNEGKKNEVKAIDNISFDIYEGEVFGLVGESGSGKTTIGRAILKLYDINKGEIDFDGETISHL
KGKELHEFRKNAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLVNSKEERDQKVQDLLALVGLNKDHSTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLTAIPEPDPESERNRIHEEYDPSAELDGQPREMREITPGHFVLCTEAEAEAYKQEL

Nucleotide

• Length: 930 bp

>NTDB_id=210616 BTR42_RS02200 WP_077496208.1 392138..393067(+) (amiF) [Streptococcus gallolyticus subsp. gallolyticus DSM 16831]
ATGACTGAAAATAGAAAAAAGCTTGTTGAACTTAAAAATGTATCATTGACTTTTAATGAAGGTAAAAAGAACGAAGTAAA
AGCTATTGATAATATCAGTTTTGATATTTACGAAGGTGAAGTTTTCGGTCTTGTTGGAGAATCAGGTTCTGGTAAGACAA
CCATTGGTCGTGCTATTTTGAAATTGTACGACATTAATAAAGGTGAAATTGATTTTGATGGCGAAACTATCTCTCACCTT
AAAGGAAAAGAATTGCACGAATTCCGTAAAAATGCTCAAATGATTTTCCAAGACCCACAAGCTAGTCTTAATGGTCGTAT
GAAAATTCGTGACATTGTTGCGGAAGGACTTGACATCCATAAATTAGTTAACAGTAAAGAAGAACGTGACCAAAAAGTTC
AAGATTTACTTGCTTTAGTTGGACTTAACAAAGACCATTCAACACGCTATCCACATGAATTTTCAGGTGGACAACGTCAA
CGTATTGGTATCGCTCGTGCTCTTGCTGTTGAACCAAAGTTCATCATTGCCGATGAACCAATTTCAGCCCTTGACGTGTC
AATCCAAGCTCAAGTTGTTAACCTTATGCAAAAACTTCAAAGAGAACAGGGGTTAACATATCTCTTTATCGCTCACGATT
TGTCAATGGTTAAATACATCTCAGATCGTATTGGGGTTATGCACTGGGGTAAAATGCTTGAAATTGGAACATCTGATGAT
GTCTATAATCATCCAATTCACCCATATACTAAGAGCTTATTGACTGCAATTCCAGAACCAGACCCAGAATCTGAAAGAAA
TCGTATCCATGAAGAATACGATCCAAGTGCAGAACTAGATGGCCAACCACGTGAAATGCGTGAAATTACACCTGGCCACT
TTGTTCTTTGTACAGAAGCAGAAGCAGAAGCTTATAAACAAGAATTATAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (30-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-272)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.754	98.706	0.54
amiF	Streptococcus salivarius strain HSISS4	54.754	98.706	0.54
amiF	Streptococcus thermophilus LMG 18311	54.426	98.706	0.537