Detailed information NTG0210476

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: BTV22_RS06810
• Genome accession: NZ_CP018807
• Coordinates: 1566271..1567338 (+)
• Length: 355 a.a.
• NCBI ID: WP_075293444.1
• Uniprot ID: A0A9Q6Z1S4
• Organism: Histophilus somni strain USDA-ARS-USMARC-63373
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1561271..1572338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BTV22_RS06795 (BTV22_06785)	asd	1562447..1563331 (+)	885	WP_075293446.1	archaetidylserine decarboxylase	-
BTV22_RS06800 (BTV22_06790)	-	1563358..1563990 (+)	633	WP_012341178.1	FKBP-type peptidyl-prolyl cis-trans isomerase	-
BTV22_RS06805 (BTV22_06795)	-	1564228..1566147 (+)	1920	WP_075293445.1	ABC transporter ATP-binding protein	-
BTV22_RS06810 (BTV22_06800)	recA	1566271..1567338 (+)	1068	WP_075293444.1	recombinase RecA	Machinery gene
BTV22_RS06815 (BTV22_06805)	recX	1567446..1567910 (+)	465	WP_075293443.1	recombination regulator RecX	-
BTV22_RS06820 (BTV22_06810)	proS	1568013..1569728 (+)	1716	WP_075293442.1	proline--tRNA ligase	-
BTV22_RS06825 (BTV22_06815)	-	1569866..1571942 (+)	2077	Protein_1325	TonB-dependent receptor domain-containing protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 37983.58 Da
• Isoelectric Point: 4.9632

>NTDB_id=210476 BTV22_RS06810 WP_075293444.1 1566271..1567338(+) (recA) [Histophilus somni strain USDA-ARS-USMARC-63373]
MATPEEKAKALEAALGQIEKQFGKGAIMKLGDTQKLDIEAISTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSV
IAQAQKAGKTCAFIDAEHALDPIYAAKLGVDVKELLISQPDNGEQALEICDALVRSGAVDVVIVDSVAALTPKAEIEGEM
GDTHVGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGVVFGNPETTTGGNALKFYASVRLDIRRVGSIKNGDEVIG
NETRVKVVKNKVAPPFRQVDFQILYGEGISRNGELIELGVKHKLVNKSGAWFSYEGEKIGQGKANAMKWLAENPDQAAVL
EQKLRSELLANPEKALLADIEAESEQDISGTESDF

Nucleotide

• Length: 1068 bp

>NTDB_id=210476 BTV22_RS06810 WP_075293444.1 1566271..1567338(+) (recA) [Histophilus somni strain USDA-ARS-USMARC-63373]
ATGGCAACCCCAGAAGAAAAAGCAAAAGCACTTGAAGCCGCTCTAGGGCAAATTGAGAAACAATTTGGTAAAGGTGCGAT
TATGAAATTAGGAGACACCCAAAAACTGGATATCGAGGCAATTTCAACCGGTTCACTTAGTTTAGATGTTGCTCTAGGTA
TTGGTGGCTTACCAATGGGACGTATTGTTGAAATTTTTGGTCCTGAATCTTCAGGTAAAACTACTTTAACATTATCTGTC
ATCGCTCAAGCACAAAAAGCGGGGAAAACCTGTGCATTTATTGATGCGGAACACGCCCTTGATCCGATTTATGCTGCTAA
ATTAGGTGTTGATGTTAAAGAATTATTAATTTCTCAACCTGACAATGGTGAACAGGCACTGGAAATCTGTGATGCCTTAG
TTCGTTCCGGTGCTGTAGATGTGGTTATTGTTGACTCTGTTGCCGCTTTAACGCCTAAAGCAGAAATTGAAGGCGAAATG
GGTGATACTCATGTTGGTTTGCAGGCAAGACTTATGTCGCAAGCATTACGTAAATTAACAGGTCAGATCAAAAACTCAAA
TTGTTTGGTCGTCTTTATCAACCAAATTCGCATGAAAATTGGTGTCGTTTTTGGCAATCCTGAAACTACGACAGGTGGTA
ATGCTTTAAAATTCTATGCTTCTGTTCGCCTTGATATTCGTCGTGTTGGTAGTATCAAAAATGGCGATGAAGTCATTGGT
AATGAAACTCGTGTAAAAGTGGTTAAAAATAAAGTAGCACCTCCGTTCCGACAAGTGGACTTCCAAATTTTATACGGTGA
AGGTATTTCTAGAAATGGTGAGCTTATTGAATTGGGTGTAAAACACAAGTTGGTAAATAAATCAGGTGCTTGGTTCTCTT
ATGAGGGCGAAAAAATTGGTCAAGGTAAAGCAAATGCAATGAAATGGTTAGCTGAAAATCCTGATCAAGCTGCTGTTTTG
GAGCAAAAATTACGTTCAGAATTATTGGCAAATCCGGAAAAAGCACTATTAGCAGATATTGAAGCTGAATCAGAACAAGA
TATATCCGGAACGGAAAGTGATTTTTAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	75.424	99.718	0.752
recA	Vibrio cholerae strain A1552	76.276	93.803	0.715
recA	Vibrio cholerae O1 biovar El Tor strain E7946	76.276	93.803	0.715
recA	Pseudomonas stutzeri DSM 10701	76.923	91.549	0.704
recA	Neisseria gonorrhoeae strain FA1090	73.684	90.986	0.67
recA	Neisseria gonorrhoeae MS11	73.684	90.986	0.67
recA	Neisseria gonorrhoeae MS11	73.684	90.986	0.67
recA	Acinetobacter baylyi ADP1	68.895	96.901	0.668
recA	Acinetobacter baumannii D1279779	68.023	96.901	0.659
recA	Ralstonia pseudosolanacearum GMI1000	71.037	92.394	0.656
recA	Helicobacter pylori 26695	61.471	95.775	0.589
recA	Helicobacter pylori strain NCTC11637	61.471	95.775	0.589
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.692	91.549	0.583
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	62.349	93.521	0.583
recA	Bacillus subtilis subsp. subtilis str. 168	63.75	90.141	0.575
recA	Streptococcus pneumoniae TIGR4	58.382	97.465	0.569
recA	Streptococcus pneumoniae Rx1	58.382	97.465	0.569
recA	Streptococcus pneumoniae D39	58.382	97.465	0.569
recA	Streptococcus pneumoniae R6	58.382	97.465	0.569
recA	Streptococcus mitis SK321	57.925	97.746	0.566
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.245	92.113	0.555
recA	Streptococcus mutans UA159	60	91.549	0.549
recA	Streptococcus pyogenes NZ131	59.692	91.549	0.546
recA	Latilactobacillus sakei subsp. sakei 23K	60.248	90.704	0.546
recA	Streptococcus mitis NCTC 12261	59.021	92.113	0.544
recA	Lactococcus lactis subsp. cremoris KW2	56.923	91.549	0.521