Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   BSU_40960 Genome accession   NC_000964
Coordinates   4205556..4206404 (-) Length   282 a.a.
NCBI ID   NP_391976.1    Uniprot ID   P26497
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4200556..4211404
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSU_40930 (BSU40930) yyaE 4201070..4203073 (-) 2004 NP_391973.1 putative oxidoreductase (molybdoenzyme) -
  BSU_40939 (BSU40939) yyzM 4203124..4203330 (-) 207 YP_003097803.1 putative nucleic acid binding protein -
  BSU_40940 (BSU40940) yyaD 4203424..4204440 (-) 1017 NP_391974.1 putative transporter -
  BSU_40950 (BSU40950) sprC 4204900..4205517 (+) 618 NP_391975.1 spore-specific protease -
  BSU_40960 (BSU40960) spo0J 4205556..4206404 (-) 849 NP_391976.1 site-specific DNA-binding protein Regulator
  BSU_40970 (BSU40970) parA 4206397..4207158 (-) 762 NP_391977.1 chromosome partitioning protein; transcriptional regulator -
  BSU_40980 (BSU40980) yyaB 4207406..4207846 (+) 441 NP_391978.2 putative antibiotic immunity protein -
  BSU_40990 (BSU40990) nocA 4207897..4208748 (-) 852 NP_391979.1 DNA-binding protein Spo0J-like -
  BSU_41000 (BSU41000) rsmG 4208870..4209589 (-) 720 NP_391980.1 7-methylguanosine methyltransferase (16S rRNA, nucleotide G527) -

Sequence

Protein


Download         Length: 282 a.a.        Molecular weight: 32210.16 Da        Isoelectric Point: 8.3881

>NTDB_id=21021 BSU_40960 NP_391976.1 4205556..4206404(-) (spo0J) [Bacillus subtilis subsp. subtilis str. 168]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSERES

Nucleotide


Download         Length: 849 bp        

>NTDB_id=21021 BSU_40960 NP_391976.1 4205556..4206404(-) (spo0J) [Bacillus subtilis subsp. subtilis str. 168]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCCTTTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAACAGCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAACTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGGGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 5NOC
  PDB 6SDK

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

92.199

0.387