Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | BRW83_RS00050 | Genome accession | NZ_CP018787 |
| Coordinates | 7973..9028 (+) | Length | 351 a.a. |
| NCBI ID | WP_005882714.1 | Uniprot ID | C3XCV6 |
| Organism | Oxalobacter formigenes strain HC-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2973..14028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BRW83_RS00025 (BRW83_0004) | - | 3657..3905 (-) | 249 | WP_005882726.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| BRW83_RS00030 (BRW83_0005) | coaD | 3965..4453 (-) | 489 | WP_005882724.1 | pantetheine-phosphate adenylyltransferase | - |
| BRW83_RS00035 (BRW83_0006) | rsmD | 4492..5133 (-) | 642 | WP_050757806.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| BRW83_RS00040 (BRW83_0007) | - | 5170..6519 (-) | 1350 | WP_005882719.1 | M16 family metallopeptidase | - |
| BRW83_RS00045 (BRW83_0008) | - | 6558..7901 (-) | 1344 | WP_005882717.1 | M16 family metallopeptidase | - |
| BRW83_RS00050 (BRW83_0009) | pilA | 7973..9028 (+) | 1056 | WP_005882714.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| BRW83_RS00055 (BRW83_0010) | - | 9040..9720 (+) | 681 | WP_036604126.1 | cell division ATP-binding protein FtsE | - |
| BRW83_RS00060 (BRW83_0011) | - | 9717..10646 (+) | 930 | WP_005882710.1 | cell division protein FtsX | - |
| BRW83_RS00065 (BRW83_0012) | rpoH | 10855..11754 (+) | 900 | WP_005882708.1 | RNA polymerase sigma factor RpoH | - |
| BRW83_RS00070 (BRW83_0013) | - | 11776..12552 (-) | 777 | WP_050757757.1 | methyltransferase domain-containing protein | - |
| BRW83_RS00075 (BRW83_0014) | - | 12731..13492 (+) | 762 | WP_005882704.1 | phosphoribosyltransferase family protein | - |
| BRW83_RS00080 (BRW83_0015) | - | 13494..13964 (+) | 471 | WP_005882702.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
Sequence
Protein
Download Length: 351 a.a. Molecular weight: 37616.89 Da Isoelectric Point: 4.9325
>NTDB_id=210199 BRW83_RS00050 WP_005882714.1 7973..9028(+) (pilA) [Oxalobacter formigenes strain HC-1]
MFSFFKKKTGDIPPEQDNSESSLADSSLTPHESSEVSPGNIDASSGIAKQDTEKKQSWLSRLKSGLAKTSANLNIFGGTT
IDEELFEELETALLVSDVGMPATEYLLDELRRKVKEEKLTQPSEIKTALAALLTDLLAPLQKNLEIGRHNPLVIMMAGVN
GAGKTTTIGKLAQHLQNNDQTVLLAAGDTFRAAAREQLAVWGDRNKITVIAQESGDPAAVAFDAVQSAKAKNINVVMVDT
AGRLPTQSHLMEELKKVKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDETLGLTGLIVTKLDGTPKGGILAAIAKN
HPVPVYFIGVGEKIDDLQPFVAEEFSNALLS
MFSFFKKKTGDIPPEQDNSESSLADSSLTPHESSEVSPGNIDASSGIAKQDTEKKQSWLSRLKSGLAKTSANLNIFGGTT
IDEELFEELETALLVSDVGMPATEYLLDELRRKVKEEKLTQPSEIKTALAALLTDLLAPLQKNLEIGRHNPLVIMMAGVN
GAGKTTTIGKLAQHLQNNDQTVLLAAGDTFRAAAREQLAVWGDRNKITVIAQESGDPAAVAFDAVQSAKAKNINVVMVDT
AGRLPTQSHLMEELKKVKRVIGKGMDEAPHEIILVIDGNTGQNALAQVKAFDETLGLTGLIVTKLDGTPKGGILAAIAKN
HPVPVYFIGVGEKIDDLQPFVAEEFSNALLS
Nucleotide
Download Length: 1056 bp
>NTDB_id=210199 BRW83_RS00050 WP_005882714.1 7973..9028(+) (pilA) [Oxalobacter formigenes strain HC-1]
ATGTTTAGCTTCTTCAAAAAGAAAACCGGCGATATTCCGCCCGAACAGGATAACAGTGAATCCTCTTTGGCAGACTCGTC
ATTGACGCCACATGAGTCTTCTGAAGTCTCTCCCGGTAATATAGATGCATCTTCAGGCATTGCCAAGCAAGATACTGAAA
AAAAGCAATCCTGGCTGAGTCGCCTCAAAAGCGGGCTTGCCAAAACCTCGGCCAATCTGAATATTTTCGGTGGAACCACC
ATCGATGAAGAATTGTTCGAAGAACTGGAAACAGCTTTGCTCGTTTCAGATGTCGGAATGCCCGCCACGGAATATCTTCT
TGACGAACTTCGCCGGAAAGTGAAAGAAGAAAAGCTGACGCAGCCTTCTGAAATCAAGACGGCACTTGCCGCTTTATTGA
CCGATCTGCTGGCTCCCTTGCAAAAAAACCTCGAAATCGGCCGCCATAACCCTCTGGTTATCATGATGGCCGGTGTGAAT
GGCGCAGGTAAAACAACGACCATCGGCAAACTGGCGCAGCACCTGCAAAACAACGATCAGACCGTCCTTCTGGCAGCCGG
TGACACTTTCCGTGCTGCCGCACGGGAACAGCTTGCCGTCTGGGGCGACCGGAATAAAATTACCGTCATCGCGCAGGAAT
CCGGCGATCCGGCTGCCGTCGCTTTCGACGCCGTTCAGTCAGCAAAAGCAAAAAACATCAACGTCGTCATGGTCGACACG
GCAGGCAGGTTGCCGACGCAATCGCATTTGATGGAAGAACTTAAAAAGGTAAAACGGGTCATTGGTAAAGGGATGGATGA
AGCGCCACACGAAATCATCCTTGTCATCGATGGAAACACGGGGCAAAACGCACTGGCACAGGTCAAGGCATTCGACGAAA
CCCTGGGCCTGACAGGCCTGATCGTCACGAAGCTGGACGGCACGCCGAAAGGCGGCATTCTGGCTGCCATCGCGAAAAAT
CATCCTGTTCCCGTTTATTTTATCGGTGTCGGTGAAAAAATCGACGATTTGCAACCCTTTGTTGCCGAAGAATTTTCAAA
CGCATTGTTGAGCTAA
ATGTTTAGCTTCTTCAAAAAGAAAACCGGCGATATTCCGCCCGAACAGGATAACAGTGAATCCTCTTTGGCAGACTCGTC
ATTGACGCCACATGAGTCTTCTGAAGTCTCTCCCGGTAATATAGATGCATCTTCAGGCATTGCCAAGCAAGATACTGAAA
AAAAGCAATCCTGGCTGAGTCGCCTCAAAAGCGGGCTTGCCAAAACCTCGGCCAATCTGAATATTTTCGGTGGAACCACC
ATCGATGAAGAATTGTTCGAAGAACTGGAAACAGCTTTGCTCGTTTCAGATGTCGGAATGCCCGCCACGGAATATCTTCT
TGACGAACTTCGCCGGAAAGTGAAAGAAGAAAAGCTGACGCAGCCTTCTGAAATCAAGACGGCACTTGCCGCTTTATTGA
CCGATCTGCTGGCTCCCTTGCAAAAAAACCTCGAAATCGGCCGCCATAACCCTCTGGTTATCATGATGGCCGGTGTGAAT
GGCGCAGGTAAAACAACGACCATCGGCAAACTGGCGCAGCACCTGCAAAACAACGATCAGACCGTCCTTCTGGCAGCCGG
TGACACTTTCCGTGCTGCCGCACGGGAACAGCTTGCCGTCTGGGGCGACCGGAATAAAATTACCGTCATCGCGCAGGAAT
CCGGCGATCCGGCTGCCGTCGCTTTCGACGCCGTTCAGTCAGCAAAAGCAAAAAACATCAACGTCGTCATGGTCGACACG
GCAGGCAGGTTGCCGACGCAATCGCATTTGATGGAAGAACTTAAAAAGGTAAAACGGGTCATTGGTAAAGGGATGGATGA
AGCGCCACACGAAATCATCCTTGTCATCGATGGAAACACGGGGCAAAACGCACTGGCACAGGTCAAGGCATTCGACGAAA
CCCTGGGCCTGACAGGCCTGATCGTCACGAAGCTGGACGGCACGCCGAAAGGCGGCATTCTGGCTGCCATCGCGAAAAAT
CATCCTGTTCCCGTTTATTTTATCGGTGTCGGTGAAAAAATCGACGATTTGCAACCCTTTGTTGCCGAAGAATTTTCAAA
CGCATTGTTGAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
60.526 |
86.61 |
0.524 |