Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   BUE86_RS06540 Genome accession   NZ_CP018785
Coordinates   1335600..1336226 (-) Length   208 a.a.
NCBI ID   WP_020884792.1    Uniprot ID   A0A839BJN6
Organism   Enterobacter ludwigii strain AA4     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1330600..1341226
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BUE86_RS06525 helD 1330837..1332891 (-) 2055 WP_079231204.1 DNA helicase IV -
  BUE86_RS06530 - 1333015..1333461 (+) 447 WP_014169434.1 YccF domain-containing protein -
  BUE86_RS06535 yccS 1333481..1335643 (+) 2163 WP_020884791.1 YccS family putative transporter -
  BUE86_RS06540 sxy/tfoX 1335600..1336226 (-) 627 WP_020884792.1 TfoX/Sxy family DNA transformation protein Regulator
  BUE86_RS06545 sulA 1336444..1336953 (+) 510 WP_032677816.1 SOS-induced cell division inhibitor SulA -
  BUE86_RS06550 ompA 1337308..1338363 (+) 1056 WP_020884794.1 porin OmpA -
  BUE86_RS06555 matP 1338433..1338885 (-) 453 WP_014169429.1 macrodomain Ter protein MatP -
  BUE86_RS06560 - 1339072..1340832 (+) 1761 WP_063215663.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23864.38 Da        Isoelectric Point: 9.2489

>NTDB_id=210159 BUE86_RS06540 WP_020884792.1 1335600..1336226(-) (sxy/tfoX) [Enterobacter ludwigii strain AA4]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERSQRDRRNRLKDLPNLTFQLEVLLFEAGITDEETLRELGARASWLKMRAKN
KALSIKVLFALEGAIAGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=210159 BUE86_RS06540 WP_020884792.1 1335600..1336226(-) (sxy/tfoX) [Enterobacter ludwigii strain AA4]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTTTCACCCTTAGGTGAAATCCACCATCGTGCGCT
GTTCGGGGGGTATACCCTGGCCGTAGATGATGCCGTCTTCGCTATGGTCTCCGATGGGGAACTGTATCTCCGGGCCTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCTCGTCATTCTTAACCCTGATGAAACGGGGTCGTCCGGTGCTGCTCAAT
TATTATCGTGTCGATGACGGACTGTGGCAGGACAGAGAACGACTGCTTCAGCTCTCCTCGTTCGCGCTCAATGCGGCACG
AAAAGAGCGTTCGCAGCGTGATCGGCGAAACCGCCTCAAGGACTTGCCCAATCTCACCTTTCAGCTTGAAGTGCTGCTCT
TTGAAGCCGGAATCACTGATGAAGAGACGCTGCGGGAGCTGGGTGCCCGTGCGAGCTGGCTAAAGATGCGGGCGAAAAAT
AAAGCGCTCAGCATTAAAGTGCTCTTCGCACTGGAAGGGGCCATCGCCGGACTTCATGAAGCGGCACTCCCGGCGGGAAT
TCGCCGGGAGTTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A839BJN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577

Multiple sequence alignment