Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BI317_RS17520 Genome accession   NZ_CP018731
Coordinates   3811207..3811608 (-) Length   133 a.a.
NCBI ID   WP_023904776.1    Uniprot ID   A0AAU0BDV7
Organism   Xanthomonas hortorum pv. gardneri strain ICMP 7383     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3806207..3816608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BI317_RS17505 (BI317_17505) - 3808221..3810257 (-) 2037 WP_074058007.1 methyl-accepting chemotaxis protein -
  BI317_RS17510 (BI317_17510) - 3810297..3810827 (-) 531 WP_006450736.1 chemotaxis protein CheW -
  BI317_RS17515 (BI317_17515) - 3810827..3811189 (-) 363 WP_006450735.1 response regulator -
  BI317_RS17520 (BI317_17520) pilG 3811207..3811608 (-) 402 WP_023904776.1 twitching motility response regulator PilG Regulator
  BI317_RS17525 (BI317_17525) gshB 3811845..3812795 (+) 951 WP_074058008.1 glutathione synthase -
  BI317_RS17530 (BI317_17530) - 3812792..3813667 (+) 876 WP_023904778.1 energy transducer TonB -
  BI317_RS27895 - 3813988..3814181 (+) 194 Protein_3290 hypothetical protein -
  BI317_RS17535 (BI317_17535) tsaB 3814333..3815055 (-) 723 WP_074058009.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14690.07 Da        Isoelectric Point: 7.1350

>NTDB_id=209914 BI317_RS17520 WP_023904776.1 3811207..3811608(-) (pilG) [Xanthomonas hortorum pv. gardneri strain ICMP 7383]
MSEHIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=209914 BI317_RS17520 WP_023904776.1 3811207..3811608(-) (pilG) [Xanthomonas hortorum pv. gardneri strain ICMP 7383]
ATGAGTGAACACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGACGATTCGAAGACTATTCGCCG
CACCGCCGAAACGCTGCTCAAGCGAGAAGGGTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACTCGTGAAGAACTACTGAGCGCGATTCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment