Detailed information NTG0020991

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: BPP_RS04220
• Genome accession: NC_002928
• Coordinates: 918804..920003 (+)
• Length: 399 a.a.
• NCBI ID: WP_041937118.1
• Uniprot ID: -
• Organism: Bordetella parapertussis 12822
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 913804..925003

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BPP_RS04195 (BPP0844)	-	915664..916050 (+)	387	WP_010927711.1	MOSC N-terminal beta barrel domain-containing protein	-
BPP_RS04200 (BPP0845)	-	916058..917275 (-)	1218	WP_003808568.1	benzoate/H(+) symporter BenE family transporter	-
BPP_RS04205 (BPP0846)	-	917272..917523 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
BPP_RS04210 (BPP0847)	coaD	917578..918087 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
BPP_RS04215 (BPP0848)	rsmD	918108..918728 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
BPP_RS04220 (BPP0849)	pilA	918804..920003 (+)	1200	WP_041937118.1	signal recognition particle-docking protein FtsY	Machinery gene
BPP_RS04225 (BPP0850)	-	920050..921648 (-)	1599	WP_010927713.1	CYTH and CHAD domain-containing protein	-
BPP_RS04230 (BPP0851)	phnE	921887..922708 (-)	822	WP_003808584.1	phosphonate ABC transporter, permease protein PhnE	-
BPP_RS04235 (BPP0852)	phnE	922705..923574 (-)	870	WP_169507383.1	phosphonate ABC transporter, permease protein PhnE	-
BPP_RS04240 (BPP0853)	phnC	923592..924362 (-)	771	WP_010927715.1	phosphonate ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 399 a.a.
• Molecular weight: 41695.66 Da
• Isoelectric Point: 5.2904

>NTDB_id=20991 BPP_RS04220 WP_041937118.1 918804..920003(+) (pilA) [Bordetella parapertussis 12822]
MFSFFKKKSPPPAAPAQPAPPPEAVDAGSAAPAQPQPAEPQPAPMPAPQPEPQPEPQPQQPPEPAPPAMASPPVAESQPP
VAEPQPPVAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKVDENLFEELESALIMADAGIEATEKLLAALRARVKKE
RIDDPAQVKTALRQLLADHLWPLERSFDLGRAQPLVVMIAGVNGAGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQ
LVEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTAGRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVD
GNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGSQGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1200 bp

>NTDB_id=20991 BPP_RS04220 WP_041937118.1 918804..920003(+) (pilA) [Bordetella parapertussis 12822]
ATGTTCAGCTTCTTCAAGAAAAAATCCCCTCCGCCCGCCGCGCCGGCCCAGCCCGCGCCGCCGCCGGAGGCAGTGGACGC
AGGGTCAGCCGCACCTGCGCAGCCTCAACCCGCCGAGCCGCAACCGGCCCCGATGCCGGCCCCCCAGCCCGAGCCGCAGC
CCGAGCCGCAGCCGCAACAACCGCCCGAGCCGGCGCCGCCGGCCATGGCGTCGCCGCCTGTCGCCGAGTCGCAGCCACCG
GTCGCCGAGCCGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGGCCTCGTGGCTGAGCCGGCTCAAACAGGG
CCTGTCGCGCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTCGACGAGAACCTGTTCGAGGAACTGGAGT
CGGCGCTGATCATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGCCGCGCTGCGCGCGCGCGTCAAGAAAGAG
CGCATCGACGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCGACCATCTGTGGCCGCTGGAGCGGTCCTT
CGACCTGGGGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGCGCGGGCAAGACGACCTCGATCGGCAAGC
TGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGACACCTTCCGCGCGGCGGCGCGCGAGCAA
TTGGTCGAATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCGGCGATCCGGCCGCGGTGGCGTTCGACTC
GGTCAATGCCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCCGGCCGCCTGCCCACGCAGCTGCACCTGA
TGGAAGAATTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGCGCCGCATGAAGTGCTGCTGGTGGTCGAT
GGCAACACCGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCATCACCCTCACCGGCCTGGTCGTCACCAA
GCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGCCAGGGCGTGCGGCCCATCCCGGTCTATT
GGATCGGCGTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGAGTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (195-397)

• SRP54-type protein, helical bundle domain (SRP54_N) (115-174)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48.7	100	0.516