Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BJD10_RS19105 Genome accession   NZ_CP018728
Coordinates   4246263..4246664 (-) Length   133 a.a.
NCBI ID   WP_023904776.1    Uniprot ID   A0AAU0BDV7
Organism   Xanthomonas hortorum pv. gardneri strain JS749-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4241263..4251664
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BJD10_RS19090 (BJD10_19090) - 4243277..4245313 (-) 2037 WP_006450737.1 methyl-accepting chemotaxis protein -
  BJD10_RS19095 (BJD10_19095) - 4245353..4245883 (-) 531 WP_006450736.1 chemotaxis protein CheW -
  BJD10_RS19100 (BJD10_19100) - 4245883..4246245 (-) 363 WP_006450735.1 response regulator -
  BJD10_RS19105 (BJD10_19105) pilG 4246263..4246664 (-) 402 WP_023904776.1 twitching motility response regulator PilG Regulator
  BJD10_RS19110 (BJD10_19110) gshB 4246901..4247851 (+) 951 WP_006450733.1 glutathione synthase -
  BJD10_RS19115 (BJD10_19115) - 4247848..4248723 (+) 876 WP_023904778.1 energy transducer TonB -
  BJD10_RS19125 (BJD10_19125) - 4249397..4250320 (+) 924 WP_074065963.1 IS110 family transposase -
  BJD10_RS19130 (BJD10_19130) tsaB 4250607..4251329 (-) 723 WP_006452753.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14690.07 Da        Isoelectric Point: 7.1350

>NTDB_id=209896 BJD10_RS19105 WP_023904776.1 4246263..4246664(-) (pilG) [Xanthomonas hortorum pv. gardneri strain JS749-3]
MSEHIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=209896 BJD10_RS19105 WP_023904776.1 4246263..4246664(-) (pilG) [Xanthomonas hortorum pv. gardneri strain JS749-3]
ATGAGTGAACACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGACGATTCGAAGACTATTCGCCG
CACCGCCGAAACGCTGCTCAAGCGAGAAGGGTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAACAACCTCAAATCATTTTTGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAGTCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGCTCCGAGCAATATCTGACCAAGCCATTCACTCGTGAAGAACTACTGAGCGCGATTCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment