Detailed information NTG0020977

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: AYT36_RS04770
• Genome accession: NC_002927
• Coordinates: 1019501..1020568 (+)
• Length: 355 a.a.
• NCBI ID: WP_010925998.1
• Uniprot ID: -
• Organism: Bordetella bronchiseptica RB50
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1014501..1025568

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AYT36_RS04745 (BB0938)	-	1016229..1016615 (+)	387	WP_003808567.1	MOSC N-terminal beta barrel domain-containing protein	-
AYT36_RS04750 (BB0939)	-	1016623..1017840 (-)	1218	WP_003808568.1	benzoate/H(+) symporter BenE family transporter	-
AYT36_RS04755 (BB0940)	-	1017837..1018088 (-)	252	WP_003808570.1	YfhL family 4Fe-4S dicluster ferredoxin	-
AYT36_RS04760 (BB0941)	coaD	1018143..1018652 (-)	510	WP_003808574.1	pantetheine-phosphate adenylyltransferase	-
AYT36_RS04765 (BB0942)	rsmD	1018673..1019293 (-)	621	WP_003808577.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
AYT36_RS04770 (BB0943)	pilA	1019501..1020568 (+)	1068	WP_010925998.1	signal recognition particle-docking protein FtsY	Machinery gene
AYT36_RS04775 (BB0944)	-	1020615..1022213 (-)	1599	WP_010925999.1	CYTH and CHAD domain-containing protein	-
AYT36_RS04780 (BB0945)	phnE	1022454..1023275 (-)	822	WP_003808584.1	phosphonate ABC transporter, permease protein PhnE	-
AYT36_RS04785 (BB0946)	phnE	1023272..1024141 (-)	870	WP_172452875.1	phosphonate ABC transporter, permease protein PhnE	-
AYT36_RS04790 (BB0947)	phnC	1024159..1024929 (-)	771	WP_003808589.1	phosphonate ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 37273.67 Da
• Isoelectric Point: 5.4828

>NTDB_id=20977 AYT36_RS04770 WP_010925998.1 1019501..1020568(+) (pilA) [Bordetella bronchiseptica RB50]
MPAPQPEPQPEPQPQQPPEPAPPAMASPPVAEPQPPVAEPQPPVAAAPEAPRKASWLSRLKQGLSRTGQNIGGLFVGVKV
DENLFEELESALIMADAGIEATEKLLAALRARVKKERIDDPAQVKTALRQLLADHLRPLERSFDLGRAQPLVVMIAGVNG
AGKTTSIGKLAHTFQRQGASVLLAAGDTFRAAAREQLVEWGSRNNVTVISQDGGDPAAVAFDSVNAGRARNVGVVMVDTA
GRLPTQLHLMEELKKIRRVIGKAEASAPHEVLLVVDGNTGQNALAQIRAFDAAITLTGLVVTKLDGTAKGGTLAAVAAGS
QGVRPIPVYWIGVGEGLEDLQPFVADEFAAALLAD

Nucleotide

• Length: 1068 bp

>NTDB_id=20977 AYT36_RS04770 WP_010925998.1 1019501..1020568(+) (pilA) [Bordetella bronchiseptica RB50]
ATGCCAGCCCCCCAGCCCGAGCCGCAGCCCGAGCCGCAGCCGCAACAACCGCCCGAGCCGGCGCCGCCGGCCATGGCGTC
GCCGCCTGTCGCCGAGCCGCAGCCACCGGTCGCCGAGCCGCAGCCACCGGTCGCGGCCGCGCCCGAGGCGCCCCGCAAGG
CCTCGTGGCTGAGCCGGCTCAAACAGGGCCTGTCGCGCACCGGCCAGAACATCGGCGGGCTGTTCGTCGGCGTGAAGGTC
GACGAGAACCTGTTCGAGGAACTGGAGTCGGCGCTGATCATGGCCGACGCGGGCATCGAGGCCACCGAGAAACTGCTGGC
CGCGCTGCGCGCGCGCGTCAAGAAAGAGCGCATCGACGATCCGGCGCAGGTCAAGACGGCGCTGCGCCAATTGCTGGCCG
ACCATCTGCGGCCGCTGGAGCGGTCCTTCGACCTGGGGCGGGCCCAGCCCCTGGTGGTCATGATCGCCGGCGTCAACGGC
GCGGGCAAGACGACCTCGATCGGCAAGCTGGCGCATACCTTCCAGCGCCAGGGCGCCAGCGTGCTGCTGGCGGCCGGGGA
CACCTTCCGCGCGGCGGCGCGCGAGCAATTGGTCGAATGGGGCAGCCGCAACAATGTGACCGTGATCTCGCAGGATGGCG
GCGATCCGGCCGCGGTGGCGTTCGACTCGGTCAATGCCGGACGTGCGCGCAACGTGGGCGTGGTGATGGTGGATACGGCC
GGCCGCCTGCCCACGCAGCTGCACCTGATGGAAGAATTGAAGAAGATCCGCCGCGTCATCGGCAAGGCCGAGGCCAGCGC
GCCGCATGAAGTGCTGCTGGTGGTCGATGGCAACACCGGCCAGAACGCGCTGGCGCAAATCCGCGCCTTCGACGCCGCCA
TCACCCTCACCGGCCTGGTCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCACGCTGGCGGCCGTGGCCGCCGGCAGC
CAGGGCGTGCGGCCCATCCCGGTCTATTGGATCGGCGTGGGCGAGGGGTTGGAGGACCTGCAGCCCTTCGTGGCCGACGA
GTTCGCCGCCGCCCTGCTGGCCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (71-130)

• SRP54-type protein, GTPase domain (SRP54) (151-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.623	97.183	0.521