Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   SAV_RS11130 Genome accession   NC_002758
Coordinates   2157917..2158633 (+) Length   238 a.a.
NCBI ID   WP_000688493.1    Uniprot ID   G9IE49
Organism   Staphylococcus aureus subsp. aureus Mu50     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2152917..2163633
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SAV_RS11100 (SAV2033) - 2153134..2153760 (+) 627 WP_000522381.1 nitroreductase family protein -
  SAV_RS11105 (SAV2034) - 2154121..2154906 (+) 786 WP_000867951.1 carbon-nitrogen family hydrolase -
  SAV_RS16055 hld 2155506..2155586 (-) 81 WP_000046022.1 delta-hemolysin -
  SAV_RS11115 (SAV2036) - 2155876..2156439 (+) 564 WP_001105696.1 accessory gene regulator AgrB -
  SAV_RS11120 (SAV2037) agrD 2156442..2156585 (+) 144 WP_001094921.1 cyclic lactone autoinducer peptide AgrD -
  SAV_RS11125 (SAV2038) agrC 2156615..2157898 (+) 1284 WP_000447888.1 quorum-sensing sensor histidine kinase AgrC -
  SAV_RS11130 (SAV2039) agrA 2157917..2158633 (+) 717 WP_000688493.1 quorum-sensing response regulator AgrA Regulator
  SAV_RS11135 - 2158708..2158817 (+) 110 Protein_2097 hypothetical protein -
  SAV_RS11140 (SAV2040) - 2159005..2159964 (-) 960 WP_001253315.1 carbohydrate kinase family protein -
  SAV_RS11145 (SAV2041) - 2159961..2161445 (-) 1485 WP_000141432.1 sucrose-6-phosphate hydrolase -
  SAV_RS11150 (SAV2042) - 2161594..2162544 (-) 951 WP_000790331.1 LacI family DNA-binding transcriptional regulator -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27920.92 Da        Isoelectric Point: 6.3009

>NTDB_id=20968 SAV_RS11130 WP_000688493.1 2157917..2158633(+) (agrA) [Staphylococcus aureus subsp. aureus Mu50]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKK

Nucleotide


Download         Length: 717 bp        

>NTDB_id=20968 SAV_RS11130 WP_000688493.1 2157917..2158633(+) (agrA) [Staphylococcus aureus subsp. aureus Mu50]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACAAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCAGAATTAAGAACTCGAATTATAGATTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAAAATAA

Domains

Predicted by InterproScan.

LytTr DNA-binding domain (LytTR)

(151-236)

Response regulator receiver domain (Response_reg)

(3-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G9IE49

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

99.58

0.996

Multiple sequence alignment