Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   BSU_10040 Genome accession   NC_000964
Coordinates   1077440..1078183 (+) Length   247 a.a.
NCBI ID   NP_388885.1    Uniprot ID   P55339
Organism   Bacillus subtilis subsp. subtilis str. 168     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1072440..1083183
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSU_09980 (BSU09980) yhaI 1072768..1073109 (+) 342 NP_388879.1 hypothetical protein -
  BSU_09990 (BSU09990) scoC 1073106..1073717 (-) 612 NP_388880.1 transcriptional regulator of extracellular protease production, sporulation and bacilysin production (MarR family) -
  BSU_10000 (BSU10000) yhaH 1073895..1074251 (-) 357 NP_388881.1 putative membrane protein; acid tolerance protein -
  BSU_10009 (BSU10009) yhzF 1074381..1074572 (+) 192 YP_003097700.1 membrane protein of unknown function -
  BSU_10010 (BSU10010) trpP 1074646..1075164 (-) 519 NP_388882.2 tryptophan transporter or sensor -
  BSU_10020 (BSU10020) serC 1075289..1076368 (-) 1080 NP_388883.1 phosphoserine aminotransferase -
  BSU_10030 (BSU10030) hinT 1076515..1076952 (-) 438 NP_388884.1 promiscuous Hit-family phosphohydrolase, adenosine phosphoramidase -
  BSU_10040 (BSU10040) pptA 1077440..1078183 (+) 744 NP_388885.1 ABC transporter (ATP-binding protein) Regulator
  BSU_10050 (BSU10050) ecsB 1078176..1079402 (+) 1227 NP_388886.1 ABC transporter (permease subunit) -
  BSU_10060 (BSU10060) ecsC 1079422..1080132 (+) 711 NP_388887.1 putative hydrolase -
  BSU_10070 (BSU10070) sndC 1080150..1081340 (-) 1191 NP_388888.2 N-acetyl amino acid acetylase, promiscuous activity -
  BSU_10080 (BSU10080) yhfA 1081413..1082804 (-) 1392 NP_388889.1 putative transporter -

Sequence

Protein


Download         Length: 247 a.a.        Molecular weight: 27722.20 Da        Isoelectric Point: 5.9114

>NTDB_id=20966 BSU_10040 NP_388885.1 1077440..1078183(+) (pptA) [Bacillus subtilis subsp. subtilis str. 168]
MSLLSVKDLTGGYTRNPVLKNVSFTLEPNQIVGLIGLNGAGKSTTIRHIIGLMDPHKGSIELNGKTFAEDPEGYRSQFTY
IPETPVLYEELTLMEHLELTAMAYGLSKETMEKRLPPLLKEFRMEKRLKWFPAHFSKGMKQKVMIMCAFLAEPALYIIDE
PFLGLDPLAINALLERMNEAKKGGASVLMSTHILATAERYCDSFIILHNGEVRARGTLSELREQFGMKDAALDDLYLELT
KEDAGHE

Nucleotide


Download         Length: 744 bp        

>NTDB_id=20966 BSU_10040 NP_388885.1 1077440..1078183(+) (pptA) [Bacillus subtilis subsp. subtilis str. 168]
ATGTCTCTGCTATCGGTAAAAGACTTGACCGGCGGATATACAAGGAATCCGGTTTTAAAAAACGTATCATTCACCCTTGA
ACCGAATCAAATTGTCGGCTTAATCGGGCTGAATGGTGCTGGTAAAAGTACAACAATCAGACACATCATCGGGCTGATGG
ACCCGCATAAAGGTTCAATCGAATTAAACGGTAAAACGTTTGCTGAGGATCCGGAAGGCTACCGTTCACAATTTACCTAT
ATACCTGAAACACCTGTTTTATACGAAGAATTGACGCTGATGGAGCATCTTGAACTAACAGCCATGGCATATGGACTGTC
AAAAGAAACGATGGAGAAAAGGCTGCCTCCGCTACTAAAGGAATTCCGAATGGAAAAGAGGCTGAAGTGGTTCCCGGCCC
ATTTTTCTAAAGGAATGAAGCAGAAGGTTATGATTATGTGCGCATTTTTGGCAGAGCCTGCGCTCTACATTATTGATGAG
CCTTTTCTAGGGCTTGATCCGCTTGCCATTAACGCGCTGCTTGAACGGATGAATGAAGCGAAAAAAGGCGGGGCGAGCGT
GCTGATGTCAACACACATTTTGGCAACGGCAGAACGCTATTGCGATTCGTTTATTATTTTACATAACGGCGAGGTGCGGG
CGCGCGGCACGCTGTCAGAGCTCAGAGAGCAGTTTGGAATGAAGGACGCGGCGCTGGACGATTTGTATCTTGAGCTTACA
AAGGAAGACGCTGGCCATGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(19-162)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P55339

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

56.904

96.761

0.551
  pptA Streptococcus thermophilus LMD-9

56.485

96.761

0.547

Multiple sequence alignment