Detailed information NTG0209656

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: BG259_RS14300
• Genome accession: NZ_CP018680
• Coordinates: 2972009..2973016 (-)
• Length: 335 a.a.
• NCBI ID: WP_005450580.1
• Uniprot ID: K5TI37
• Organism: Vibrio harveyi strain QT520
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2967009..2978016

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BG259_RS14275 (BG259_14275)	rraA	2967237..2967764 (-)	528	WP_074051034.1	ribonuclease E activity regulator RraA	-
BG259_RS14280 (BG259_14280)	-	2967840..2968757 (-)	918	WP_005450584.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
BG259_RS14285 (BG259_14285)	hslU	2969066..2970397 (-)	1332	WP_009698879.1	HslU--HslV peptidase ATPase subunit	-
BG259_RS14290 (BG259_14290)	hslV	2970427..2970978 (-)	552	WP_009698878.1	ATP-dependent protease subunit HslV	-
BG259_RS14295 (BG259_14295)	-	2971298..2971843 (-)	546	WP_005450581.1	SPOR domain-containing protein	-
BG259_RS14300 (BG259_14300)	cytR	2972009..2973016 (-)	1008	WP_005450580.1	DNA-binding transcriptional regulator CytR	Regulator
BG259_RS14305 (BG259_14305)	priA	2973223..2975424 (-)	2202	WP_074051035.1	primosomal protein N'	-
BG259_RS14310 (BG259_14310)	rpmE	2975721..2975942 (+)	222	WP_005450576.1	50S ribosomal protein L31	-
BG259_RS14315 (BG259_14315)	rpsJ	2976399..2976710 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
BG259_RS14320 (BG259_14320)	rplC	2976725..2977354 (+)	630	WP_005435072.1	50S ribosomal protein L3	-
BG259_RS14325 (BG259_14325)	rplD	2977372..2977974 (+)	603	WP_005435074.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36918.48 Da
• Isoelectric Point: 5.9796

>NTDB_id=209656 BG259_RS14300 WP_005450580.1 2972009..2973016(-) (cytR) [Vibrio harveyi strain QT520]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPDTAVLCQFRQQGYQQALRRAGISKEEQYSIVADFSFEGGVQAVRKLLELPEPPTA
LFCHCDTMAIGAIQEAKRLGLRIPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=209656 BG259_RS14300 WP_005450580.1 2972009..2973016(-) (cytR) [Vibrio harveyi strain QT520]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCAGGGGTATCTACTGCTACGGTATCGCGAGCATTAATGAATCCAGAAAA
AGTCTCTTCATCAACAAGAAAGAGAGTGGAAGATGCCGTACTTGAAGCTGGTTATTCACCAAATTCATTAGCTCGTAATT
TACGTAGAAATGAATCAAAGACCATTGTCACTATCGTACCGGACATATGCGATCCGTATTTCTCTGAAATCATTCGCGGT
ATCGAAGATGCAGCAATGGAACACGGTTACCTAGTTCTTCTTGGCGATAGCGGTCAGCAGAAAAAGCGCGAAAGCTCATT
CGTAAACTTAGTATTCACCAAGCAAGCTGATGGCATGTTACTACTGGGCACCGACTTACCATTCGATGTCAGCAAGCCAG
AGCAGAAAAACCTACCACCAATGGTCATGGCGTGCGAATTCGCTCCTGAGCTGGAACTACCAACGGTGCATATCGATAAC
TTGACCTCTGCATTTGAAGCCGTGAACTACCTGACGCAACTTGGTCACAAGCGTATTGCTCAGATCTCTGGTCCAGATAC
TGCGGTGCTGTGCCAGTTCCGCCAACAAGGTTATCAACAAGCACTTCGCCGTGCTGGTATTAGTAAAGAAGAGCAATACA
GCATTGTGGCTGACTTCTCTTTCGAAGGTGGCGTTCAAGCCGTACGCAAACTTCTCGAATTGCCTGAACCACCAACCGCT
CTATTCTGTCACTGCGACACCATGGCGATTGGTGCTATCCAAGAAGCGAAACGTCTTGGTCTGCGTATTCCGCAGGATTT
ATCGGTTGTCGGCTTTGATGATATTCAATTCGCGCAATACTGCGATCCACCGTTAACCACCATCTCTCAACCACGTTATG
AGATTGGTCGCCAAGCAATGTTAATGATGCTAGAGCTACTGAAAGGTCACGACGTGCACTCAGGCTCTCGCTTGCTTGAA
ACTAAATTAGTTGTGCGTGGTAGTGCAGCGCCACCACCTTTGCGCTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: K5TI37

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	96.386	99.104	0.955
cytR	Vibrio cholerae C6706	90.663	99.104	0.899