Detailed information NTG0209532

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: CRN68_RS23825
• Genome accession: NZ_CP023960
• Coordinates: 4370402..4371634 (-)
• Length: 410 a.a.
• NCBI ID: WP_001161834.1
• Uniprot ID: -
• Organism: Escherichia coli strain FDAARGOS_448
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 4365402..4376634

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CRN68_RS23805 (CRN68_23800)	-	4366157..4366903 (+)	747	WP_000497656.1	glycosyltransferase family 2 protein	-
CRN68_RS23810 (CRN68_23805)	-	4366884..4367255 (+)	372	WP_001309753.1	capsular polysaccharide biosynthesis protein	-
CRN68_RS23815 (CRN68_23810)	-	4367252..4368829 (+)	1578	WP_099004481.1	hypothetical protein	-
CRN68_RS23820 (CRN68_23815)	-	4369047..4370156 (-)	1110	Protein_4111	IS3 family transposase	-
CRN68_RS23825 (CRN68_23820)	kpsS	4370402..4371634 (-)	1233	WP_001161834.1	capsular biosynthesis protein	Regulator
CRN68_RS23830 (CRN68_23825)	-	4371669..4373696 (-)	2028	WP_000579512.1	capsular polysaccharide biosynthesis protein	-
CRN68_RS23835 (CRN68_23830)	kdsB	4373693..4374433 (-)	741	WP_000030749.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CRN68_RS23840 (CRN68_23835)	-	4374443..4376119 (-)	1677	WP_138069334.1	polysaccharide biosynthesis/export family protein	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 48905.37 Da
• Isoelectric Point: 10.0344

>NTDB_id=209532 CRN68_RS23825 WP_001161834.1 4370402..4371634(-) (kpsS) [Escherichia coli strain FDAARGOS_448]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWHEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDIKLFKKFRGYLLVKTQVNWVYYSNSNLCAYNSK
WAHVNLMDYN

Nucleotide

• Length: 1233 bp

>NTDB_id=209532 CRN68_RS23825 WP_001161834.1 4370402..4371634(-) (kpsS) [Escherichia coli strain FDAARGOS_448]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCCTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGGCGGAGTAAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGCATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAATGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTGAGTAAGG
AATATGGCTTAGGCGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACAATTAACAGTACGGCGGGGATCTCTGCGCTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAAGGATTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCAGATATAAAACTGTTTAAGAAGT
TTCGCGGGTATTTATTGGTTAAGACGCAGGTTAATTGGGTTTATTATTCCAATAGTAATCTATGTGCATATAATAGTAAG
TGGGCTCATGTTAATTTAATGGATTATAATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.898	95.366	0.38