Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | CRM97_RS05515 | Genome accession | NZ_CP023866 |
| Coordinates | 1016311..1016694 (+) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain FDAARGOS_421 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1011311..1021694
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRM97_RS05495 (CRM97_05495) | - | 1011390..1013324 (-) | 1935 | WP_002867720.1 | ribonuclease R family protein | - |
| CRM97_RS05500 (CRM97_05500) | ilvC | 1013443..1014465 (+) | 1023 | WP_002852218.1 | ketol-acid reductoisomerase | - |
| CRM97_RS05505 (CRM97_05505) | - | 1014469..1015551 (+) | 1083 | WP_002859983.1 | divergent polysaccharide deacetylase family protein | - |
| CRM97_RS05510 (CRM97_05510) | dprA | 1015541..1016314 (+) | 774 | WP_002867721.1 | DNA-processing protein DprA | Machinery gene |
| CRM97_RS05515 (CRM97_05515) | dprB | 1016311..1016694 (+) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| CRM97_RS05520 (CRM97_05520) | - | 1016723..1017562 (+) | 840 | WP_011049748.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| CRM97_RS05525 (CRM97_05525) | msrA | 1017738..1018235 (-) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| CRM97_RS05530 (CRM97_05530) | ppa | 1018277..1018795 (-) | 519 | WP_002867724.1 | inorganic diphosphatase | - |
| CRM97_RS05535 (CRM97_05535) | adk | 1018805..1019383 (-) | 579 | WP_011049749.1 | adenylate kinase | - |
| CRM97_RS05540 (CRM97_05540) | aspS | 1019380..1021131 (-) | 1752 | WP_011049750.1 | aspartate--tRNA ligase | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=209312 CRM97_RS05515 WP_002852281.1 1016311..1016694(+) (dprB) [Campylobacter jejuni strain FDAARGOS_421]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=209312 CRM97_RS05515 WP_002852281.1 1016311..1016694(+) (dprB) [Campylobacter jejuni strain FDAARGOS_421]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |